| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_3302 |
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| Symbol | |
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| ID | 8334655 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 3644343 |
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| End bp | 3645344 |
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| Gene Length | 1002 bp |
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| Protein Length | 333 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644956447 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_003114050 |
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| Protein GI | 256392486 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.726058 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACCA CAGCGCAACA GCCTCTGAAC TCCGGCTTCG GCTTCGACTC CACGGCCGGG
GAAGTGATCA AGGGCATCGA CCTGACCGGC AAGACCGCGA TCGTCACCGG CGGCGCCAGC
GGCATCGGGG TGGAGACCGT GCGCGCGCTG CGGGAGGCCG GGGCGCAGGT CATCGTGCCG
GCGCGGAACA CCGCTGCGGC GCAAGACACC CTGCGGGAGG CCCTGCACGA CCTGCACGAC
CTCGACGGCG TGCGCGTCGA GCCGCTCGAC CTCAGCGACC CGGCCTCCAT CGACGCCTTC
GCCGAGCGCT TCCTCGCCGA GGACCGGCCG CTGCACCTGC TGATCAACAA CGCCGGCGTC
ATGGCGACGC CGCTGGCCCG AAACGCGCGC GGCGTCGAGA TGCAGTTCGC CGTCAACCAC
CTCGGGCACT TCCGCCTGAC CACGCGGCTG TGGCCGGCAC TGGCCGCCGC CGGCGGGGCG
CGCGTCGTCG CGCTGTCCTC GCGCGGCCAC CGCTACTCCC CGGTGGTGTT CGACGACCTG
AACTTCGAGC ACCGCCCCTA CGAGCCGTTC CTGGGCTACG GACAGTCCAA GACCGCCAAC
GTCCTGTTCG CCGTCGAGCT CGACCGCCGC GGCGCCGCCG ACGGCGTCCG CGCCTTCTCC
GTGCACCCCG GCGCGATCCT CGACACCGCC CTGACCCGCC ACATGGACCC CGCCGCGCTG
CGGGCCGCCG GCGTCGAGGA GCGCGACGGC CGTCTCGTCG TCGACGACGG ACGTCCGGTC
AAGACCACGC AGCAGGGCGC GGCGACCACG ATCTGGTGCG CGACCAGCCC CGCGCTGGAC
GGCCTGGGCG GCGTCTACTG CGAGGACTGC GACGTCAGCC CGGTCGTCAG CGCCGAGGAG
CTCAAGCCGG GGGAGCTGCT GGAAGGGCCC GGCGTGCTGC CCTACGCCGT CGATCAGGAC
GCTGCGGCAC GGTTGTGGGA GGTCAGCGAG CAGCTGATGT AG
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| Protein sequence | MSTTAQQPLN SGFGFDSTAG EVIKGIDLTG KTAIVTGGAS GIGVETVRAL REAGAQVIVP
ARNTAAAQDT LREALHDLHD LDGVRVEPLD LSDPASIDAF AERFLAEDRP LHLLINNAGV
MATPLARNAR GVEMQFAVNH LGHFRLTTRL WPALAAAGGA RVVALSSRGH RYSPVVFDDL
NFEHRPYEPF LGYGQSKTAN VLFAVELDRR GAADGVRAFS VHPGAILDTA LTRHMDPAAL
RAAGVEERDG RLVVDDGRPV KTTQQGAATT IWCATSPALD GLGGVYCEDC DVSPVVSAEE
LKPGELLEGP GVLPYAVDQD AAARLWEVSE QLM
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