| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_3294 |
|---|
| Symbol | |
|---|
| ID | 8334647 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | - |
|---|
| Start bp | 3631610 |
|---|
| End bp | 3634939 |
|---|
| Gene Length | 3330 bp |
|---|
| Protein Length | 1109 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 644956439 |
|---|
| Product | coagulation factor 5/8 type domain protein |
|---|
| Protein accession | YP_003114042 |
|---|
| Protein GI | 256392478 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGCCA CCGGAAGCCG CACCCCCGCC CCACCTCTGC GCAGACGGCT CACGGCGCTG
GCCACGGCCG CGGCGAGCAC GGTCGCCGGC GCGGCCCTGC TGGTCGGCGC CTCGCCGGCG
CACGCCATGA ACGGACCGGG CACCCCGCCG TACTGGGCCC AGTCGCCGTT CAGCGTGCCG
AGCGGGACCG GCGCGAGTCT GCCGTTCACC GAGTACGAGG CGGAGGCTTC GACCACCACC
GGGACGCGCG TCGGGCCGGA CTTCACGCAG GGCTCGCTCG CCAGCGAGGC CTCCGGCCGT
GAGGCGGTGC AGCTCACCGG TTCGGGCCAG TACGTGCAGT TCACGCTCAC CAGCGCCGCC
AACGCCTTCG ACCTGCGCTA CTCGCTCGCG CAGGGCGCCT CCGGCTCGCT GTCGGTGTAC
GTCAACGGCA CCAAGCAGAG CAAGGAGCTG TCGCTGACGT CGGCGTACAG CTACATCAGC
ACCGGCGGCA TCACCGGCAG CAAGACGCAC AAGTTCTTCG ACGACACCCG CATGATGTTC
GGCCAGACCC TGGCCGCCGG GACCACGGTG AAGGTGCAGG TCGACTCCTC CGACAGCGCC
GTGCCCTACA CCGTCGACGT CGCAGACTTC TACAACGTCC CGACCGCGGC GAGCCAGCCC
GCCGGTTCGG TCTCGGTCGT CACCGAGGGC GCGGACCCCA CTGGCGCCAA CGACTCCAGC
AACGCCTTCA ACACCGCGAT CAACGCCGCC AACGCCGCGA ACCAGTCGGT CTGGATCCCG
CCGGGCACCT ACCTGGTCAC CAACCCGATC CAGACCCAGA AGGCGACGAT CGTCGGCGCC
GGCAACTGGT ACTCGCAGAT CAAGACCAAC ATGTTCATCC GCAACTCCTC GGCGGTCTCC
GGGCCGGTGA ACCTCAGCGG CTTCGCGATC CTGGGCAGCA CCGTCGGACG CCATGACGAC
AGCTCGGCGA ACGGCATCGA CGGCTCGCTG GGCAACGGCT TCACCGTCAA CGGCTTGTGG
ATCCAGGACA CCAACGTCGG CTTCTGGCTG CAATACGGGA ACAGCAACGG CACCGTGGAG
AACACGGTCG TGGAGTCCAC CGACGCCGAC GGCCTGAACT TCAACGGCAA CGCCAGCGGC
AACGCCAGCG GCAACACCGT GAAGAACAAC TTCCTGCGCG GCACCGGCGA CGACGCCCTG
GCGATCTGGT CCTACCCGAC CGCCGACTCC AACATCACCT TCGCCAACAA CACGATCGTG
GCGCCGACGC TGGCCAACGG CATCGCGGAC TACGGCGGGG CGAACAACAC GATCTCCAAC
AACGTGATCG CCGACGACAA CGCCCTGGGC AGCGGTCTGA CGATCTCCAA CGAGGCGTTC
CTGCAGCCGT TCTCGCCGTT GTCCGGGACC ATCACGGTCT CCGGCAACTA CCTGATCCGC
GCCGGCGCGT ACAACCCGAA CTGGGCGCAC CCGATGGGCG CCGTGCAGTT CGACTCCTAC
GACTCCGATT TCAGCAACGT GACGGTCAAC TACAGCGGCG GGGCGATCCT GGACAGCCCG
TATGAGGCCT TTGAGATCGT CGGCGGAGAC GGGACCGGGC ACGTCGTCAA CGGGCTGAAC
ATCAGCAACG TGAAGGTGCA GAACACCGGT ACCACCGTCT TCCAGGCGGA GACCGGCGGC
GCGGCGAGTG TCAGCGGCCT GACAGCCAGC GGGCTCGGCG TCTCAGGCAC GTACAACAAC
AGCTACCCCG GCAACGTCGC GGGCGCCTAC ACCTTCAACC TCGGCAGCGG GAACTCCGGC
TGGAGTACCA CCCCGGTGCT CACCACGTTC CCGGATCCGG TGCAGCCCGG CGCTCTGCAC
GCCTCGCCGG CCGCGCTGTC GTTCGGCGAC GTGAAGTCCG GCACGACCAG CGCGCCGCAG
TCGGTGACGG TGACGAACCC GGGCACCAGC GCCGCGCCGA TCTCCTCGAT CAGCGCCACC
GGGCCCTTCT CGCAGACCAA CAACTGCGGC AGCTCCCTGG CCGCCGGCGC CTCCTGCACC
GCGCAGGTGA CGTTCGCCCC GACCACCGGC GGCAACGCCA CCGGGACGCT GACCGTCGCG
ACCAGCGCTC CGGGCGGTCC GCTGAGCGTC GCGCTGTCCG GACGCGGCAT CACCTCCACG
ACGAACCTGG CGCTGGGCCA GCCGGCCACG GCGAGCAGCA CGCAGGGCAC GTTCGTGGCG
GGCAACGCCA CCGACGGGAA CACCGGCAGC TACTGGGAGA GCGCCGACGG CGCGGGCTAC
CCGCAGACCA TCACGGTGGA CCTGGGCTCG ACGCAGCCGA TCGGCTCCAC GACGCTGAAC
CTGCCGCCGT CCTCGGCATG GGGCGCGCGT ACGCAGACGC TGTCCATTCT GGGCAGCACT
GACGGGACGA ACTTCACGCA GATCGTCGGC TCGGCCGCGC ACACCTTCGA CCCCGCGAGC
GGAAACACTG CGACCATCGC GCTGCCGTCC GGCACGAGCG CCCGTTACGT ACGCCTGAGC
TTCACCGGCA ACACCGGCTG GAGCGCGGCG CAGCTGTCGG AGTTCCAGAT CTTCCCCGGC
GGCGCGGCCA ACGGCAGTGC CCTGACAGCG AACCCGTCGA ACGTGTCGTT CGGCAGCGTG
GCAGTCGGCT CGACGAGCAG CGCGCAGACC GTGACGGTGT CCAACCCAGG CGGCACTGCG
GCAGCGATCT CCTCGATCAG CACGAGCGCA CCCTTCTCGC AGACCAACAC CTGCGGCACC
TCCCTAGCCG CCGGCGCCTC CTGCACAGTC AAGGTGACCT TCACCCCGAC CACCGCCAGC
AGCGCGAACG GCACCCTCTC AGTCGCCAGC AACGCCCCCG GCAGCCCACT GACCGTAGCG
CTCTCCGGCA CCGGCACCTC CACCGGCGGC AACACCAACC TCGCCCTCAA CAAGCCCACA
ACAGCCAGCG GCACCACCCA GAACTACACC CCCGGCAACA CCGTCGACGG CAACACCAGC
AGCTACTGGG AGAGCACCGA CAACGCCTTC CCGCAGTGGC TCCAGGTCGA CCTCGGCGCC
TCCGCCAGCG TCAGCCGCAT CGTGATGGAC CTCCCGCCCT CCTCCTCATG GGGCGCCCGC
ACCCAAACCA TCCAGATCCA GGGCAGCACC GACGGCACGA ACTTCACCAC CCTCGCCCCC
TCCCACGCCT ACACCTTCGA CCCCGCCACG GGGAACACGG CGACCGCCAC CTTCACCGCC
GCCACCGTGC GCTACGTGAG GCTGACGTTC ACCGCCAACA CCGGCTGGCC GGCCGGTCAG
CTCTCGGAAC TGCAAGTGTT TTCCCAGTAG
|
|---|
| Protein sequence | MSATGSRTPA PPLRRRLTAL ATAAASTVAG AALLVGASPA HAMNGPGTPP YWAQSPFSVP
SGTGASLPFT EYEAEASTTT GTRVGPDFTQ GSLASEASGR EAVQLTGSGQ YVQFTLTSAA
NAFDLRYSLA QGASGSLSVY VNGTKQSKEL SLTSAYSYIS TGGITGSKTH KFFDDTRMMF
GQTLAAGTTV KVQVDSSDSA VPYTVDVADF YNVPTAASQP AGSVSVVTEG ADPTGANDSS
NAFNTAINAA NAANQSVWIP PGTYLVTNPI QTQKATIVGA GNWYSQIKTN MFIRNSSAVS
GPVNLSGFAI LGSTVGRHDD SSANGIDGSL GNGFTVNGLW IQDTNVGFWL QYGNSNGTVE
NTVVESTDAD GLNFNGNASG NASGNTVKNN FLRGTGDDAL AIWSYPTADS NITFANNTIV
APTLANGIAD YGGANNTISN NVIADDNALG SGLTISNEAF LQPFSPLSGT ITVSGNYLIR
AGAYNPNWAH PMGAVQFDSY DSDFSNVTVN YSGGAILDSP YEAFEIVGGD GTGHVVNGLN
ISNVKVQNTG TTVFQAETGG AASVSGLTAS GLGVSGTYNN SYPGNVAGAY TFNLGSGNSG
WSTTPVLTTF PDPVQPGALH ASPAALSFGD VKSGTTSAPQ SVTVTNPGTS AAPISSISAT
GPFSQTNNCG SSLAAGASCT AQVTFAPTTG GNATGTLTVA TSAPGGPLSV ALSGRGITST
TNLALGQPAT ASSTQGTFVA GNATDGNTGS YWESADGAGY PQTITVDLGS TQPIGSTTLN
LPPSSAWGAR TQTLSILGST DGTNFTQIVG SAAHTFDPAS GNTATIALPS GTSARYVRLS
FTGNTGWSAA QLSEFQIFPG GAANGSALTA NPSNVSFGSV AVGSTSSAQT VTVSNPGGTA
AAISSISTSA PFSQTNTCGT SLAAGASCTV KVTFTPTTAS SANGTLSVAS NAPGSPLTVA
LSGTGTSTGG NTNLALNKPT TASGTTQNYT PGNTVDGNTS SYWESTDNAF PQWLQVDLGA
SASVSRIVMD LPPSSSWGAR TQTIQIQGST DGTNFTTLAP SHAYTFDPAT GNTATATFTA
ATVRYVRLTF TANTGWPAGQ LSELQVFSQ
|
|---|
| |