| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_3293 |
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| Symbol | |
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| ID | 8334646 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 3630544 |
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| End bp | 3631527 |
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| Gene Length | 984 bp |
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| Protein Length | 327 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644956438 |
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| Product | Helix-turn-helix type 11 domain protein |
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| Protein accession | YP_003114041 |
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| Protein GI | 256392477 |
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| COG category | [K] Transcription |
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| COG ID | [COG2378] Predicted transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0990426 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGCGGCA TGATGGAAGA CATGCCGAAG ACCTCCGCAC GGTTGTTGTC CCTGTTGTCG
CTGTTGCAGG CGCGACGGGA TTGGCCGGGC GCTGATTTGG CGGCGCGGCT GGAGGTGAGT
CCGCGGACGG TGCGGCGTGA TGTGGATCGG TTGCGGGAGC TTGGGTATCC GATCGCGGCG
GTGAAGGGTC CGGATGGTGG GTATCGACTG GGAGCCGGTT CGGAGCTGCC GCCGCTGTTG
TTCGACGACG AGCAGGCGGT GGCGCTTGCG GCGGCGTTGC AGACTGCGGT CGCCGCTGCC
GCTCGCGTCC CCGGCATGGG GGAAGCCTCC ATGCGCGCTT TGCAGACTGT GCGGCAGGTG
ATGCCAGCGC GATTGCGGCG GCGGGTCGAC ATGTTCCAAG TGACCGCGAT CGGTCCTGCC
GAGGGTGGCG GCGCCGATGT TGGAATGGAC GTGCTGATGG CGCTCAGCGG GGCGGTGCAT
GCTCGCGAGG TGCTGCGTTT CGACTATGAC GACGTGCTGC GGAAAGTGGA GCCGCACCAT
GTTGTCGCGC GGGGCGGACG GTGGTACCTC GTGGCGTGGG ATCTCGATCG GGAGGACTGG
CGCGTGTTTC GTGCCGACCG GATCAGCCCT CGTATTCCGA CCGGTCCGCG GTTCACGCCG
CGGGAGGTGC CCGGGGGCGA CGTGGCGGCG TTTGTCACGA GTCGTTTTCA GGGCTCTGAT
GGTGCCGACG GCTGGCCTTG TCGCGGTGAG GTGATTCTGC ACGCGCCGAT CGGGGCGGTG
ACGCCGTTCG CTGCGGACGC GGTCGTGGAG GAGCTGGGAC CGGAGCGAAG CCGGCTCGTG
CTGGGGGCGT GGTCGTGGCC CGCGTTGGCG GCGAGGGTCG GTGCGTTCGA CGCTGACGTC
GAGGTGGTCG GGCCACCGGA GCTGACATCC GCCTTCGCGA TGCTGGCGCG GCGCTACGCC
GCTGCGGCAG GCCGGATGTC CTGA
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| Protein sequence | MCGMMEDMPK TSARLLSLLS LLQARRDWPG ADLAARLEVS PRTVRRDVDR LRELGYPIAA
VKGPDGGYRL GAGSELPPLL FDDEQAVALA AALQTAVAAA ARVPGMGEAS MRALQTVRQV
MPARLRRRVD MFQVTAIGPA EGGGADVGMD VLMALSGAVH AREVLRFDYD DVLRKVEPHH
VVARGGRWYL VAWDLDREDW RVFRADRISP RIPTGPRFTP REVPGGDVAA FVTSRFQGSD
GADGWPCRGE VILHAPIGAV TPFAADAVVE ELGPERSRLV LGAWSWPALA ARVGAFDADV
EVVGPPELTS AFAMLARRYA AAAGRMS
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