Gene Caci_3291 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_3291 
Symbol 
ID8334644 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp3629121 
End bp3629987 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content70% 
IMG OID644956436 
Productprotein of unknown function DUF574 
Protein accessionYP_003114039 
Protein GI256392475 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0356506 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGACA GTGCCCAGCA TCACAGGGCC GTCGAGGGCG CCGAGGGCGT CGAGGGCGTC 
GAGGGCGTCG GGCACTGGCT GCCCACGACC ATCGACACCT CGGTGGCGCA CATAGCCCGG
GTCTATGACT TCTTCCTCGG CGGCAAGGAC AACTTCCCGG CGGACCGCGA GGCCGCGGCG
CGGATCCTCA AGGGGAATCC AGGGATGCGC GACACCTGTC GCGAGCAGCG CGAGTACCTG
CGTCGCGCGG TGCGCTACCT CGCGGGCAAC GGGATCCGGC AGTTCATCGA CATCGGGACC
GGACTGCCGA CGCAGGAGAA CACCCACGAG GTCGCGCAGA AGGTGGCGCC GGACGCGCGC
ATCGCCTACA TCGACAACGA TCCGATCGTC CTGGCGCACG CCCGCGTCCT GATGGCCGAC
CAGGATCACG GCCGGACCGT CTTCATCCAC GCCGACGCGC GCGAGCCCGC CAAGCTGCTC
GCCGATCCGG CGCTGACCGA CGTCATCGAC TTCACCCAGC CGGTCGCGGT GCTGCTGATC
GGCATCCTGC ACTTCCTGCC GGACAGCGAG AACCCCGCCG AGCTGATCCG CGCCCTGCTG
GACGTCGTCC CCGCCGGCAG CTACCTGGCG ATCAGCCACG GCACGCCGGA CTTCGCCCCG
GAGATGGGCG ACGCCGTCCA GGCCGCGTAT CAGGCTTCGT CGATGCCTTG CCGAGTCCGC
ACTTCGACGG AAGTCATGGC ACTGCTGAAG GGCGTGGAGC TGGTGGACCC CGGGCTGGTG
CTGCTCGCCG AGTGGCGCCC CGACGGCCCG GTCCCCGCGA ACCGCCAGCA GATCACCTAC
GCCGCGGTCG GTCGCAAGGT CTCCTGA
 
Protein sequence
MSDSAQHHRA VEGAEGVEGV EGVGHWLPTT IDTSVAHIAR VYDFFLGGKD NFPADREAAA 
RILKGNPGMR DTCREQREYL RRAVRYLAGN GIRQFIDIGT GLPTQENTHE VAQKVAPDAR
IAYIDNDPIV LAHARVLMAD QDHGRTVFIH ADAREPAKLL ADPALTDVID FTQPVAVLLI
GILHFLPDSE NPAELIRALL DVVPAGSYLA ISHGTPDFAP EMGDAVQAAY QASSMPCRVR
TSTEVMALLK GVELVDPGLV LLAEWRPDGP VPANRQQITY AAVGRKVS