Gene Caci_3287 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_3287 
Symbol 
ID8334640 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp3624354 
End bp3625322 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content71% 
IMG OID644956432 
Producthypothetical protein 
Protein accessionYP_003114035 
Protein GI256392471 
COG category[R] General function prediction only 
COG ID[COG4188] Predicted dienelactone hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCCGT CCCACGTGTC CACCCCTCCC GTCCTGTCCT ACAGCCCGGT GGTGCTCTCC 
GTTCCCGGAC GCCCGGTCGA CCTCGAACTG CGCGTCACGG CGCCCGTCGA AGGCGCCGAC
CTGCCGGTGA TCCTGCTGTC CCACGGACAT GGCGGATCCA ACAACCTGTC CTCGCTTTAT
GGCTACGCAC CGCTCGCCAA TGCCTGGGCA GCACTGGGTT TCGCGGTCAT CCAGCCGACG
CACCTCAGCT CCCGCACTCT GAGCAGCCGG GTCGCCGATC TGCCCGGCGC GCCGCTGTTC
TGGCGGTCGC GCGCCGAGGA CATGACGCAC ATCCTCGACC GGCTCGACGC GATCGAAAAG
GCGGTGCCGC TGCTCGCCGG TCGTCTCGAC GCGGCGAAGG TCGCCGTCGC CGGACACTCG
CTCGGCGGCT TCACCGCCAG CGTACTGCTG GGTGCGCAGG TCACCGATCC CGACACCGGT
GAGGTCGTGG ACCTCGCCGA GCCGCGCATC AAGGCCGGCG TGCTGCTCGC CGCGCCCGGA
CGCGGCGGGG AGGCACTGAC CGGTCCGCGA GCCTCGATCG TGCCGTTCTT CCGCTCGGTC
GACTTCGCGA CGATGACCGC GCCGGCGCTG GTCGTCGCCG GAGACCAGGA CGATTCCCGG
CACTTCACCG ACGTCGGTCC GCAATGGCAC GCCGACCCCT ACACCCTGGC TCCCGGTCCC
AAGACGCTGC TCACGCTCTT CGGCGCCGAG CATGGTCTCG GCGGTATCGC CGGCTACGAC
GCCGCCGAGA CCACCGACGA GAACCCCGAT CGGGTCGCGG CGGTGGCGCG GCTGACGGCG
GCGTATTTGC GCTCGCAGCT GTTCGGCGGC GACGGCGACG GCGACAGCGG CGACGGCGAC
GCGTTCGAGG CGGCGTGCCA GGCACTGACC ACCGGTCCGG ACGCGTTCGG TCGCGTCGAT
TCCAAGTAG
 
Protein sequence
MSPSHVSTPP VLSYSPVVLS VPGRPVDLEL RVTAPVEGAD LPVILLSHGH GGSNNLSSLY 
GYAPLANAWA ALGFAVIQPT HLSSRTLSSR VADLPGAPLF WRSRAEDMTH ILDRLDAIEK
AVPLLAGRLD AAKVAVAGHS LGGFTASVLL GAQVTDPDTG EVVDLAEPRI KAGVLLAAPG
RGGEALTGPR ASIVPFFRSV DFATMTAPAL VVAGDQDDSR HFTDVGPQWH ADPYTLAPGP
KTLLTLFGAE HGLGGIAGYD AAETTDENPD RVAAVARLTA AYLRSQLFGG DGDGDSGDGD
AFEAACQALT TGPDAFGRVD SK