Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_3286 |
Symbol | |
ID | 8334639 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 3623673 |
End bp | 3624251 |
Gene Length | 579 bp |
Protein Length | 192 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644956431 |
Product | transcriptional regulator, TetR family |
Protein accession | YP_003114034 |
Protein GI | 256392470 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGCCCACCG AGCAGGAACC CGCCCGCAGC AAGCGCTCCG ACGCGCTCCG CAACCAGCAG ACGCTGCTCG CCGCCGCCGC CGAGGTGTTC GTGACCTCGG GGGTCGACGC GCCGATCCGG CAGATCGCGG CCAAGGCCGG CGTGGGCGTC GGCACGTTCT ACCGCCACTT CCCCACCCGC GCCGACCTGA TCACCGCCGT CTACCGGCAC CAGATCGAGG AGTGCGCCGA GGCCGGTCCG ACACTGCTGG CGAGCGCCGA CTCGCCGTTC GAGGCGCTGC GCCGGTGGAT CGACATGTTC ACCGACTTCC TGGTCACCAA GCACGGCCTG GCCGACGCCC TGCGCTCGGA CGACGCCACA TTCGCCGCGC TGCACACGTA CTTTCTCGAC CGGCTGGAAC CCGTGTGCGC GAACCTGATC GAGGCCGCCG TCGCCGCCGG CGACATCCGC GGCGACATCA GCGCCTACGA GCTGATGCGC GGGGTCGGGA ACCTGTGTGT CGGACGGGAC CTGGACGCGC GGTACGAACC ACGGCGACTG ATCGCGGTGC TGCTGGACGG GCTGCACGCA CCCCGCTGA
|
Protein sequence | MPTEQEPARS KRSDALRNQQ TLLAAAAEVF VTSGVDAPIR QIAAKAGVGV GTFYRHFPTR ADLITAVYRH QIEECAEAGP TLLASADSPF EALRRWIDMF TDFLVTKHGL ADALRSDDAT FAALHTYFLD RLEPVCANLI EAAVAAGDIR GDISAYELMR GVGNLCVGRD LDARYEPRRL IAVLLDGLHA PR
|
| |