Gene Caci_3281 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_3281 
Symbol 
ID8334634 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp3618920 
End bp3619750 
Gene Length831 bp 
Protein Length276 aa 
Translation table11 
GC content67% 
IMG OID644956426 
Productintegral membrane protein 
Protein accessionYP_003114029 
Protein GI256392465 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1651] Protein-disulfide isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.59765 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCAGA GGAACAGTGA GAAGAAGCAG TCCGCGCGCG AGCGGGTCGA GGCCGAGCGT 
CTGGCCCGGC AGCGGCGCGG ACGGCGCCGA CGGCAGTTCG TGATCATCAC CGCGGTACTG
GTCGTGCTCG GCGCCGCGAC CGGGGTCGGG ATCGCGGTCA GCACGTCGTC GAGCAAACCG
GTGGCATACA GCGTGCCGAC GAACGGCTCG GTCGTCGCCG ACAAGTACAG CGATCCCTCC
GGCAAGCAGA CCGCGCTGGC CTACGGTCCG GCCGACGCGC CGCACACACT GACCATCTAT
GAGGACTTCC GCTGCCCGAT CTGCCGGTCG CTGGAGACCG GATCGGCGTC GGTCTACAAG
TCCTATGTCG CCGCCGGAAC GCTGCGCGTG CTGTTCCATC CGGTCACGCT GATCGACGCC
AACAACCCGG GCACCAGCGG TTCGCTGTGG TCGGGCGCGG CCTCGGTGTG CGCGGCGGCG
GCCGGGAAGT TCGACGAGTA CCACGACGCG CTGTACGCCG ACCAGCCGGA CGAGACCACC
GACGGCTATA GCGATATCGC GAAGCTGATC TCAGTGGCGA AACAGATACC GGGACTGGAC
TCGCCGACCT TCGAGTCCTG CGTCACCGCC GGTACCTACA AGGGCCTGGT CCAGCAGAAC
ATGACCGACT TCAATACCCT GCGACTGCCC GGAACGCCGA CCCTGCTGCT CGACGGCAAG
CGGCTGACCA TACCGCAGTC GGTGTACAAG CTCTCCGCCG ACGGCAAGTC AGTGGTCGGA
TCCGATCCGG CGCAGCTGAA GAAGGTGCTC CAGGCTGCGG GACTTCCGTA A
 
Protein sequence
MSQRNSEKKQ SARERVEAER LARQRRGRRR RQFVIITAVL VVLGAATGVG IAVSTSSSKP 
VAYSVPTNGS VVADKYSDPS GKQTALAYGP ADAPHTLTIY EDFRCPICRS LETGSASVYK
SYVAAGTLRV LFHPVTLIDA NNPGTSGSLW SGAASVCAAA AGKFDEYHDA LYADQPDETT
DGYSDIAKLI SVAKQIPGLD SPTFESCVTA GTYKGLVQQN MTDFNTLRLP GTPTLLLDGK
RLTIPQSVYK LSADGKSVVG SDPAQLKKVL QAAGLP