Gene Caci_3276 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_3276 
Symbol 
ID8334629 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp3615430 
End bp3615672 
Gene Length243 bp 
Protein Length80 aa 
Translation table11 
GC content68% 
IMG OID644956421 
Productputative transmembrane anti-sigma factor 
Protein accessionYP_003114024 
Protein GI256392460 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.953611 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGGACCA TGGACTGCGC CACGTTCGTC GAGCTGGTCA CGGACTTCCT CGAAGGTGCC 
CTCCCGGAGG CCGAGGAGGA GCGCTTCGTT GAGCACCTGA CGCTCTGCGA CGGCTGCGAG
ACCTACCTCG AGCAGTTCCG CCGCACCATC GACACGCTCG GCGAGTTGCC GGCGGACTCG
CTGTCCGCCG AGGCGCGCGC CAAGCTCCTC ACCGCTTTCC GGGGATTCCG CCGGGGAGAG
TGA
 
Protein sequence
MGTMDCATFV ELVTDFLEGA LPEAEEERFV EHLTLCDGCE TYLEQFRRTI DTLGELPADS 
LSAEARAKLL TAFRGFRRGE