| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_3270 |
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| Symbol | |
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| ID | 8334623 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 3607572 |
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| End bp | 3608999 |
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| Gene Length | 1428 bp |
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| Protein Length | 475 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644956415 |
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| Product | amino acid permease-associated region |
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| Protein accession | YP_003114018 |
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| Protein GI | 256392454 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1113] Gamma-aminobutyrate permease and related permeases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.268652 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGAACC CGCCGTCGAC GCTGACCACC GCCCGGCCCG AGGAGGAGGA GCCGACCGGC
AGCGACGCCG GCTACCAGAA GACGCTGGCG AACTTCCAGA TCCAGATGAT CGCCTTCGGC
GGGGCGATCG GGGTCGGTCT CTTCCTCGGC TCGGCGGGGG CGATCACGCG GTCCGGTCCG
GGACTGGTGT TCGCCTACGC GCTGGCCGGC ATCTCAGCCT TCTTCGTGAT GCGCGCCCTC
GGCGAGCTGG TGCTGTACCG GCCCACGTCC GGGAGCTTCG TGGTCTACGC CAGGGAGTTC
ATCGGGCCGT GGGCCGGCTA CACATGCGGC TGGATGTACT GGCTGAACTG GGCCATGACC
GGCGTAGCGG AGCTGACGGC GGTCGGCATC TACATGCACT ACTGGTTCCC GGCGCTGCCC
CAGTGGCTCT CGGCCCTGGG CGCCCTGGCC ATCCTGATGG CCGCGAACCT GGTCTCGGTC
AAGGTCTTCG GCGACCTGGA GACCTGGTTC GCACTCTGCA AGATCCTGGC GATCCTGGTC
TTCCTGATCG TCGCCGCCGG ACTCCTGCTC ACCCACGCCG GCATCGGCAC CCAGCACGCG
GGCTGGTCCA ACGTCTCCAC CCACGGCGGC CTGCTCCCGA AGGGCATGTG GGCGGTCCTG
GTCAGCCTCC AGTCGGTGGT CTTCGCCTAC GCCGCCATCG AACTGGTCGG CATCACCGCC
GGCGAGACAG CCGAGCCGCG CAAGGTCGTC CCCAAGGCCG TCCGCGCGGT GATCTGGCGC
ATCGCCATCT TCTACGTCGG CTCCATCGGC CTGCTGGTCG TCGTCCTCCC CTGGACCCTG
TACCACGAGG GCGAGAGCCC CTTCGTGACC GTCTTCTCGA TGCTGGGCAT CCCCGGCGTC
GGCGGCGTGA TGAACTTCGT GGTCCTCACC GCAGCCCTGT CCTCCACCAA CTCAGGCCTC
TACTCCACCG GCCGCATCCT CCGCGCCCTC GCCGAACGCC ACGAGGCACC CCAATACGTC
TCCCGCATGA GCAGCCGCGG CGTCCCCTAC GGCGGCATCA TGCTGACGGC AGTGGTCTAT
CTCGCCGGCG TCCTGCTGAA CCTGGTGGTG CCCTCCCGCG CATTCGACAT CGCAACATCC
ACGGCATCCC TCGGCGTACT GACAACCTGG GCAACGATCC TGATCTGCCA AGCCCGCCTC
AAGGCAGCCT CAGAACACCC CGGCAGCCCA GTCCACCGCC CCACCTTCCG CATGCCAGGC
TCCCCCTGGA CGAACTACGC AACACTCCTG TTCCTCGCCG GCGTCCTGGC ACTGATGGCC
GACAGCGCCC AGGAGCGCCC GGTGCTCGCG GCGGTGCCAC TTATCGTGTT GGTGCTGTGG
GTCGGCTGGC GGCTGATCAA GCGGCGGTTC CCGGTAGATG CGGGGTAG
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| Protein sequence | MTNPPSTLTT ARPEEEEPTG SDAGYQKTLA NFQIQMIAFG GAIGVGLFLG SAGAITRSGP
GLVFAYALAG ISAFFVMRAL GELVLYRPTS GSFVVYAREF IGPWAGYTCG WMYWLNWAMT
GVAELTAVGI YMHYWFPALP QWLSALGALA ILMAANLVSV KVFGDLETWF ALCKILAILV
FLIVAAGLLL THAGIGTQHA GWSNVSTHGG LLPKGMWAVL VSLQSVVFAY AAIELVGITA
GETAEPRKVV PKAVRAVIWR IAIFYVGSIG LLVVVLPWTL YHEGESPFVT VFSMLGIPGV
GGVMNFVVLT AALSSTNSGL YSTGRILRAL AERHEAPQYV SRMSSRGVPY GGIMLTAVVY
LAGVLLNLVV PSRAFDIATS TASLGVLTTW ATILICQARL KAASEHPGSP VHRPTFRMPG
SPWTNYATLL FLAGVLALMA DSAQERPVLA AVPLIVLVLW VGWRLIKRRF PVDAG
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