Gene Caci_3263 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_3263 
Symbol 
ID8334616 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp3599701 
End bp3600636 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content71% 
IMG OID644956408 
Product3-Oxoacyl-(acyl-carrier-protein (ACP)) synthase III domain protein 
Protein accessionYP_003114011 
Protein GI256392447 
COG category[I] Lipid transport and metabolism 
COG ID[COG0332] 3-oxoacyl-[acyl-carrier-protein] synthase III 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGCGC TGACCGCCAT CGGCACCTAC CTGCCGCCCG AGCGCGTGCC GATCGAGGAC 
ATGGCCGAGC GCTTCGGGCT GACCGCCATG CAGACCAAGG TCTTCCGGCG CTATCACAAG
CTCGGAGCCG TCAGCCGCGA CGCCGGCGGG ACCTTGTCGG ACCTGCTGCG CGGCGCCCTG
GACGACCTCG ACGGTTTGAT CGGCAACGAG GAGCGCGTCC GGTACGTCAT CCACGCGCGC
ACCTTCCCGA CGGTCACGCC GTATCCGCTG AACCCGCTGC GCGAGCTGTG CCGGGAACGC
GGACTGGAGC ACGCCGAGAC CTTCGCCGTC GGACACCACG CCTGCGCCTC CGGGCTGCTG
GCGATCGACG TCGCCGGCCG CCTGCTGGCC GCCGACGCCG AGACGCACCC GGACGCCCTC
GCGCTGATCC TGGCCGGGGA GAAGGCGTTC ACCGGCGAGG CGCAGATGGT CCCGGAGACC
TCGTTCTTCG GCGAGGGCGC CTCCGCGTGC CTGGTCAGCG CTTCCGGCGA ACGCGACCGC
CTGCTGTCCT ACACCGCCGA TCTGCGCGGG GAGTTCGACG GCGACTCGAT GGAGCAGGCG
CTGGAGTTCC AGCGGGTCTA CTCCGACGCG CTAGGCGAGG CGATCCTGGC CGCCGTCGAG
GGCGCCGGTC TGGAGATGTC TGCGATCAGC CTGGTGCTGC CGCACAACGT CAACGTCGTG
GCGTGGCAGC GGGTCTGCAA GCGGATCGGC TTCCCGCTGG CGAAGGTCGT CCTGGACAAC
GTCGCCACCG ACGGCCACGT GTTCTGCGCC GACGCCTTCC TGAACTACCG CACCGCCGCC
CGGAAGGGTC TGCTGACGCC GGGGGAGCGC TACGTCCTCG CGGCGGCCGG CGCGGGGCGC
GGCGCGACCT TCTCCGCCAT GGTGTTCGAA CACTGA
 
Protein sequence
MTALTAIGTY LPPERVPIED MAERFGLTAM QTKVFRRYHK LGAVSRDAGG TLSDLLRGAL 
DDLDGLIGNE ERVRYVIHAR TFPTVTPYPL NPLRELCRER GLEHAETFAV GHHACASGLL
AIDVAGRLLA ADAETHPDAL ALILAGEKAF TGEAQMVPET SFFGEGASAC LVSASGERDR
LLSYTADLRG EFDGDSMEQA LEFQRVYSDA LGEAILAAVE GAGLEMSAIS LVLPHNVNVV
AWQRVCKRIG FPLAKVVLDN VATDGHVFCA DAFLNYRTAA RKGLLTPGER YVLAAAGAGR
GATFSAMVFE H