| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_3258 |
|---|
| Symbol | |
|---|
| ID | 8334611 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | + |
|---|
| Start bp | 3593773 |
|---|
| End bp | 3594597 |
|---|
| Gene Length | 825 bp |
|---|
| Protein Length | 274 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 644956403 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003114006 |
|---|
| Protein GI | 256392442 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.780433 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGCCA CGCGTTACGA CTGGGGACAG CGGCACCCCG GCATCGACCA GCTGGAGAAC
CGGATCTCCA AGGCCCGCGA GGCGGTTGTC GGGCACGCGC TGTACGCGCG GCTGCGCGAC
CAGGACGCGA TCCGGACGTT CCTGGAGCAC CACGTCTTCG CCGTCTGGGA CTTCATGTCG
CTGCTCAAGT CGCTGCAGCG CAACCTGACC TGCGTCGAGG TCCCGTGGGT GCCGACCGGC
CCGACCGGCA GCCGGCGGCT GATCAACGAC ATCGTCCTGG TCGAGGAGAG CGACGAGCTG
CGCGGCGGCT ACATCAGCCA CTTCGAGCTC TACGTCGCCG GCATGACCGA GGCCGGCGCG
GACACCTCGA GCATCGAGGC CTTCATCAGC CTGGTCCGCG CCGGCGCCTC GGTGGGCTCG
GCCCTGGTCG CCGCCGGCGT CCCGGCACCG GCCGCCGACT TCGTGGGCCA GACCTGGGAC
ATCATCGCCA CCGCACCGGT CCACTGCCAG GCCGCGGCCT TCGCCTTCGG CCGCGAGGAC
CTGATCCCCG ACATGTTCCA GCAGGTGGTC ACGGTCAACG CCACCGTCGG CGGCCTCGAC
ACCTTCGTGG ACTACCTGGC CCGCCACATC GAGGTCGACG GCGAGCAGCA CACCCCGATG
GCGATGCAGA TGCTCGCCGA CCTGTGCGGC GACGACACCG CCAAGTGGGA CGAGTGCGCC
GCCACGGTCA CCCGCGCCCT GAAGGCCCGG GCCCGCCTGT GGGACGGCAT CCTCGCCGCC
ATCGGCACCC GCGAGACGGC GCTGGTCGGA AGCAGCGATG GCTGA
|
|---|
| Protein sequence | MAATRYDWGQ RHPGIDQLEN RISKAREAVV GHALYARLRD QDAIRTFLEH HVFAVWDFMS
LLKSLQRNLT CVEVPWVPTG PTGSRRLIND IVLVEESDEL RGGYISHFEL YVAGMTEAGA
DTSSIEAFIS LVRAGASVGS ALVAAGVPAP AADFVGQTWD IIATAPVHCQ AAAFAFGRED
LIPDMFQQVV TVNATVGGLD TFVDYLARHI EVDGEQHTPM AMQMLADLCG DDTAKWDECA
ATVTRALKAR ARLWDGILAA IGTRETALVG SSDG
|
|---|
| |