Gene Caci_3257 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_3257 
Symbol 
ID8334610 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp3592856 
End bp3593773 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content68% 
IMG OID644956402 
ProductPhytanoyl-CoA dioxygenase 
Protein accessionYP_003114005 
Protein GI256392441 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG5285] Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.867901 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGCCG AATCCGTACA GACGCAGTTC GTCCTCACCG ACGAGGAGGC GGCGCTGCTG 
CCGACCGACG CCGAGGTCGA GGAATACCAG GAGCACGGCT GGTTCCTGAC CGGCAAGCTC
TTCAGCGACG ACGAGGTCGA CGCGCTCACC GACGCCGCCG ACCGCTACTA CGGCGGCGAG
CGGAGCCGGG AGCTGCCGGT GCGTCCGGCC AAGGTGGCCG CGTGGAAGCC CTCCGACGGA
CCGGTGCAGC GGCACAACGA CTACGTGCAC TACGAGAGCG ACGCGATCGC GAAGATCCTG
TGCAAGCCGC TGATCGGCGC CGTCGCCGCG CGGCTGGCGC GGGCCGACGA GATCCGGGTC
TTCCAGTCCA CGCTGATCTA CAAGCCGCCG ATCGCCGGCG AGCCGAGCAA CGTCGTGCCC
TGGCACTTCG ATCGGCACTA CTGGGCCTCG TGCACGTCCG AGGACATGCT CACGGCGTTC
ATTCCCTTCC ACGACTGCGG ACCGGAGATG GGCACCATCA CCATGGTCGA CGGCAGCCAC
CGCTGGAAGG AGGTGGGCCG CGAGGACTCG ATGGTCAAGC ACTTCGCCGA ACGGGACAAG
GCGGACCTGG AGCGCGTCCT GACCGAGAAC GCCGAGTTCA ACAACGCCGA GATCACCAAG
ATCCCGATGC TCATCCCCAA GGGGCACATG AGCTTCCACC ACTGCCGCCT CTACCACGGC
AGCGGCCCGA ACCTCAGCTC GCGGCCGCGC CGTGCCATCT CCTTCCACCT GCAGGACGGC
GCGAACCAGA ACCAGCGCTT CGCCCTCGGC GACGGGACCT TCGCCGCCTA CAACCACGAC
GTTCTCGTGC GGCGGCTGCC CGACGGCCGC CCCGACTATG CCGACCCCGA CTTCTGCCCC
GTGCTCTGGA GGAACTGA
 
Protein sequence
MTAESVQTQF VLTDEEAALL PTDAEVEEYQ EHGWFLTGKL FSDDEVDALT DAADRYYGGE 
RSRELPVRPA KVAAWKPSDG PVQRHNDYVH YESDAIAKIL CKPLIGAVAA RLARADEIRV
FQSTLIYKPP IAGEPSNVVP WHFDRHYWAS CTSEDMLTAF IPFHDCGPEM GTITMVDGSH
RWKEVGREDS MVKHFAERDK ADLERVLTEN AEFNNAEITK IPMLIPKGHM SFHHCRLYHG
SGPNLSSRPR RAISFHLQDG ANQNQRFALG DGTFAAYNHD VLVRRLPDGR PDYADPDFCP
VLWRN