| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_3231 |
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| Symbol | |
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| ID | 8334584 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 3564574 |
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| End bp | 3566553 |
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| Gene Length | 1980 bp |
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| Protein Length | 659 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644956376 |
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| Product | Amylo-alpha-16-glucosidase |
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| Protein accession | YP_003113979 |
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| Protein GI | 256392415 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3408] Glycogen debranching enzyme |
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| TIGRFAM ID | [TIGR01561] glycogen debranching enzyme, archaeal type, putative |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.393416 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCTCGA TAACGACGAC TGCGAATATG GCGGTCGTGG CGATCTCCAA CCCGTACGTT
CTAGGCACCC ATGTGTGCGG CGACCTCACC GAGGGCGCGG CTCGGGAATG GCTTGTACCC
GATGGGGTCG GCGGTTATGC CACGGGTACG GCAAGCGGGC TGCGGACCCG CAGGTATCAC
GCTCTGTTAG TGGCGGCCGA GAACGGCGGC AGCGCCCGCC GCGTCGCCCT GGCCAGCCTG
GACCCGGTGC TGGTCACGCC CTCGGGAACC GAGGTGCGGC TCGCGGTGCA CGAATGGGCC
TCCGGCGCGG TCTCCCCGGA GGGCCACACC CTGCTGGAGA GCTTCACGCT GGAGCACGGC
CTGCCGCGCT GGCGCTGGCG GGTCGGCGAC ATCGTGCTCG AAGCCGAGCT GGCTCCGGTG
CGCGGCCGTC CCGCCTACGG GTACGTCTAC CGCCTGCTCG CCGGCGGCCC GGTCACGCTC
CGCGTCGAAG CCCTCTGCAC CTGGCGCGAC CAGCACGGCG ACCGCTTCGC AGGCGGCGGC
GATCTGCGCA TGCGCCCGAC CGCCGACGGC GTCGTGATCG AGGACGCATA CCGGCTCGCC
GGACCCGGTT GGACTAGTGG CGGCCAGTGG TATCGCGACG TGTACCTGCG CGAGGAAGCA
GCACGCGGAC TCGGCGCGCG CGAGGACCTG TGGTTCGCAG GATCGTTCTC CGCACCGCTG
ACCGGGCCCG GCGAGAAGAT GCAGCTCACC GCCTGGGCCG GCGACCTCGA CGCCACTGCC
CCGCCGCCGC CCGCCGCCCG GATCGTCGAA GCAGCTCGCG ACCGTGCCGC GGCGATCGCG
GCCAAGGGCT CTGACCCGGT CGCCTCGCAG CTGCTGTTGG CCGCCGACGC CTTCGTCATC
GACCGAACGG CTGCCGACGG CACGCCGGCT CCGGACGTGG TCGCCGGATA CCCGTGGTTC
GGGACGTGGT CGCGGGACAC GATGGTCTCC TACGACGGGC TGTTCCTCAG TGCCCAGCGT
GCCGACGAGG GACGCAGCCT GCTGCGGGCC TACGCCGCGA CGCTGTCCGA GGGCATGCTC
GCCAACACCG CGGACACCGG CTCGGTCGAG TACAACACCG CCGACGGCAC GCTGTGGTTC
GTGCACGCGA TCGGCCGGCA CGTCGCCGCC ACCGGCGACG CGGACCTCGC CGCCGAGCTC
GCCCCGGCGC TCGAGGGGAT CGTTCAGGCG CACCTGGACG GCACCCGTTA CGGCATCCGG
GTGGACCCCG CGGACTCCCT GCTGACACAA GGCGCCGAGG GTTACGCGCT GACCTGGATG
GACGCCCGGG TGAACGGCCG TCCGATCACC CAGCGCGGCG GCAAGGCGGT CGAGATCAAC
GCGCTGTGGA TCAACGCCCT GGGGACGGTC GCCGACCTGT GGAAGGCCGT CGGCCGCGAC
GCCACCGGCG TCCTGCAGCG GCGCGAGGCG GCGGCCACCT CCTTCCACCG CCGGTTCCCG
AACCCCGTGT GCGGGCTCTA CGACGTCGTG GACGGCCCGC TCGGCGACGA CGCCGCACTG
CGTCCGAACC AGCTGCTCGC CTACAGCCTC CCGTACGCGC CGCTGCGCGG ACAGGCTCCG
GCGCCGATCG TCGGCGAGCA GCTGATGACG CCGCTGGGCC CGCGCACCCT GGCGCCCGGC
GACGCGGCGT ACCAGCCGCA CCACCGCGGC TCCTCCGAGC AGCGCGACGC CGCCTACCAC
CAGGGCACCG CGTGGCCCTG GCTGCTCGGG CCCTACCACG ACGCCGTCGC CGGGGCCGGC
GGCCCGGCCG CCGCCGTGTT CGGCGGACTG CCCGGCCATC TCGGGGAGGC CGGGCTCGGC
TCGGTCTCCG AGACCGCGGA CGGCGCCGCG CCGCACGCCA CCACCGGCTG TCCGTTCCAA
GCCTGGTCGG TGGCCGAGGC GCTGCGCGGC TGGACCCTGA AGAACGCAGA CTGCAGATGA
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| Protein sequence | MRSITTTANM AVVAISNPYV LGTHVCGDLT EGAAREWLVP DGVGGYATGT ASGLRTRRYH
ALLVAAENGG SARRVALASL DPVLVTPSGT EVRLAVHEWA SGAVSPEGHT LLESFTLEHG
LPRWRWRVGD IVLEAELAPV RGRPAYGYVY RLLAGGPVTL RVEALCTWRD QHGDRFAGGG
DLRMRPTADG VVIEDAYRLA GPGWTSGGQW YRDVYLREEA ARGLGAREDL WFAGSFSAPL
TGPGEKMQLT AWAGDLDATA PPPPAARIVE AARDRAAAIA AKGSDPVASQ LLLAADAFVI
DRTAADGTPA PDVVAGYPWF GTWSRDTMVS YDGLFLSAQR ADEGRSLLRA YAATLSEGML
ANTADTGSVE YNTADGTLWF VHAIGRHVAA TGDADLAAEL APALEGIVQA HLDGTRYGIR
VDPADSLLTQ GAEGYALTWM DARVNGRPIT QRGGKAVEIN ALWINALGTV ADLWKAVGRD
ATGVLQRREA AATSFHRRFP NPVCGLYDVV DGPLGDDAAL RPNQLLAYSL PYAPLRGQAP
APIVGEQLMT PLGPRTLAPG DAAYQPHHRG SSEQRDAAYH QGTAWPWLLG PYHDAVAGAG
GPAAAVFGGL PGHLGEAGLG SVSETADGAA PHATTGCPFQ AWSVAEALRG WTLKNADCR
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