Gene Caci_3227 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_3227 
Symbol 
ID8334580 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp3559166 
End bp3560125 
Gene Length960 bp 
Protein Length319 aa 
Translation table11 
GC content68% 
IMG OID644956372 
ProductAlcohol dehydrogenase GroES domain protein 
Protein accessionYP_003113975 
Protein GI256392411 
COG category[C] Energy production and conversion
[R] General function prediction only 
COG ID[COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.659744 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.4865 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTGCTA TCGCAGTACC CGAAATCGGG GGAACACCCG GTCTGACGGA GCTTCCGGTA 
CCGGGTCCGG GCGCGAGTCC AGGTCCGGAG GAGGTTCTGG TGCGGCTGAG CGCCGCCTCG
ATCAATCCGA TCGACCTGGA CATCGCGCAG GGGCGGTTGC CGTTGCCCAC GACGCAGCCG
CTCGTTCTGG GCGTGGACGG TGCGGGGCGG GTCGTCGAGG TGGGTGAGTC AGTACATGGA
TTCGTGGTCG GGGATCTCGT GCACGGGCAG TTTCTCGACG CTCCGTTGGG TCGTGGGACG
TTCGCCGAGT ACGCCGTCCT CAGCGGCTCC CCCAGCCATG GCGCTTTGCT GCGCACGCCG
GACGGCTTGT CGGCGGAGGT TGCCGCCGCG CTCCCCACGG CGGGGATGAC GGCGCTCGGT
GTTGTGGAGC TGGTGGAGCT GCGCGCTGGA CAGTCGATCC TGATCGTCGG CGCGACCGGC
GGGGTCGGGG TTTTCGCGGT GCAGCTGGCT GCGGCGCGGG GAGCTGAGGT CATCGCGACG
GCACGATCTG AGGCAGGCGC GTGGATTCGC GGGCTCGGTG CGTCGCAGAC TATTGATTAC
GGTGTCGAGG ATGTCAGTGA GCTGGTACGC GGGAGCCATC CCGACGGTGT GGACGTACTG
CTCGATCTGA CGCGCGATCA GGCTCGGTTC ACCGCGTACG CGGACCTGGT GCGGGACGGC
GGCTCGGCGG TGTCGGCGAC GTTCACCGCC TCGCCGGAGC TGCTCGCCTC CGAGCGGATC
TCGGTGACCA ACTTCATGAT GCGGGACAAG CCTGATTTGC TTGCCCGCAT CACTGATGAG
GTCGCCTCCG GGCGGGTCAC GGTCCCGATC GAGCGGACCG TCACCTTGGA CGAGGTGCCC
GAGGCGTTGG CACGTAATGC CGGCGGCGGG GCTCGTGGCA AGACGGTTGT GGTTCTCTAG
 
Protein sequence
MRAIAVPEIG GTPGLTELPV PGPGASPGPE EVLVRLSAAS INPIDLDIAQ GRLPLPTTQP 
LVLGVDGAGR VVEVGESVHG FVVGDLVHGQ FLDAPLGRGT FAEYAVLSGS PSHGALLRTP
DGLSAEVAAA LPTAGMTALG VVELVELRAG QSILIVGATG GVGVFAVQLA AARGAEVIAT
ARSEAGAWIR GLGASQTIDY GVEDVSELVR GSHPDGVDVL LDLTRDQARF TAYADLVRDG
GSAVSATFTA SPELLASERI SVTNFMMRDK PDLLARITDE VASGRVTVPI ERTVTLDEVP
EALARNAGGG ARGKTVVVL