Gene Caci_3218 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_3218 
Symbol 
ID8334571 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp3548732 
End bp3549619 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content72% 
IMG OID644956363 
Productsecreted hydrolase 
Protein accessionYP_003113966 
Protein GI256392402 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0134174 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.246696 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGAAGTT CACGTACTGT CAAAGCCGCC GTGGGGCTCT GTGCCCTGCT GGGCGCCGTG 
TCCGTCGCCA CCGCGACGTC GGCGGCCGCG CAGGCCGCCG CGACTCCGCA GGTCTACGTC
GCGCTCGGCG ACTCCATGGC CTCCGGGCCG CTGATCCCGG ACCCGACCGG GCAGCTGGCG
TGCGCGCGCT CGACCCACAA CTACGCGCAC GACATGGCCG CCTCGCTCGG CATCCCGGTC
CTGCGCGACG TCACTTGCAG CGGTGCCAGC ACCTTCCACA TGACCAACCC GCAGCCGCTG
TCGATCGCCG GGGTCTCCGC CGGCACCGCG CCGCCGCAGT TCGACGCGCT CACCCCCGAC
ACCACGCTGG TCACGCTCAC CATCGGCGGC AACGACGTCG GGCTGGTCGG CGTCGCGCAA
GCCTGCGAGC AGCTGAACCC CTTCGCAGCA CCCTGTGAAG GCAAGTACGT GGTCAACGGG
GTCGACTCGG TCGCCGCCCG CAGCGACGCC TTCGCGCCGA AGCTGGCCGC GGTCCTGGCC
GGAATCCACC AGCGCTCCCC GCAAGCCCGC GTCCTGGTGA CCGGATACGG GCTCTACATC
AAGGCCGGCG GCTGCTGGCC GACCCAGCCG CTGCTGGGCT CGGACGCCAC CTGGCTGCAG
AGCGAGGTCG ACTACCTCAA CGGCGTCATC GCCACCACCG CGGCCGCCAA CGGCGCGACC
TACGTCGACG TGCGCACCCC CAGCGCCGGT CACGACTCCT GCCAGAGCGA GAGTGCACGC
TGGGTCGAGG GCTTCGTGCC GCTATCGCTG GCCGCCCCGC TGCACCCGAA CCAAGCCGGG
GAAGCAGCGT ACGCGCGCAT CGTCGGCGCC GTGGTCGCCA ACGGCTGA
 
Protein sequence
MRSSRTVKAA VGLCALLGAV SVATATSAAA QAAATPQVYV ALGDSMASGP LIPDPTGQLA 
CARSTHNYAH DMAASLGIPV LRDVTCSGAS TFHMTNPQPL SIAGVSAGTA PPQFDALTPD
TTLVTLTIGG NDVGLVGVAQ ACEQLNPFAA PCEGKYVVNG VDSVAARSDA FAPKLAAVLA
GIHQRSPQAR VLVTGYGLYI KAGGCWPTQP LLGSDATWLQ SEVDYLNGVI ATTAAANGAT
YVDVRTPSAG HDSCQSESAR WVEGFVPLSL AAPLHPNQAG EAAYARIVGA VVANG