| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_3217 |
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| Symbol | |
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| ID | 8334570 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 3547377 |
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| End bp | 3548672 |
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| Gene Length | 1296 bp |
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| Protein Length | 431 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644956362 |
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| Product | transcriptional regulator, CdaR |
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| Protein accession | YP_003113965 |
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| Protein GI | 256392401 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3835] Sugar diacid utilization regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0250091 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.197749 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGACTC TTCGGGCACT GATTAACTGG ACGGTAACCC AGACTTCGGC GGTGGATTCT
GTGACGGATC ACAAGACCAC CGGGGATTCG GCCGGACCGC TGAGGATCGC CGGACGTCCG
GTCGCCGCGG ATCTGCGGGC GCTGGCGCCG GATCTGTCGC GGCGCGTGCT GGCACGGCTG
CTCGAGGAGT TGCCGGTCTA CGCGAACCTG CCCGGCGAGG AGGTCGCCGG CGACATCGCC
GAGATCGTGC AGCATTCGGT ACGGATGTTC GCCGACGCGA TCGAGGCGCG CCGGGTCCCG
GACGAGACGG AGTTGGCTGC CCAGCGGCGG TCCGCACAGC GCCGGGCGGA GGAAGGCGTG
CCGCTGGACG CGATCCTGGC CGCGTATCAG CTCGGCATCG CGATGGTGTG GTCTCAGGTG
TCTGCGGGAG CCACACCGGG CGATCACGCT GATCTGCGCG AGGTCCTCGA GATCCTGCTG
GAGATCCAGC GCCGGATCCT GTGCTCGGTC ACGGAAAGCT ATCTGGCCGC GCGGCGCACG
ATCGACAGCG AGGAGCACAG CGGGCGGCAC GCTTTGATGG CGGCGCTGCT GTCCGGGGCG
GAGCCGGACG GGACGGTGCG CGCGGCGCCT CGCTACGCCG TGCTGACACT GCGTCTGGAA
CGGCATCCCG ACGAGGACGC CGCCGCCCCG GGGGTCGCGG CGCGGCGGAA GATCCGGCGG
GTCCGGGAGG CGTTGGACGC CTTCTGGGAT CAGCCGTGTC TGACGGCGTT CCGGTCGGAC
CGTGGCACGG TTCTGATGCC TTTGGACGAC GATGCTGCGG TTCTCGATCA CGAGGGACTA
CGGGCTCTGA TTGTCGACGC GGCTGGAGCG GCCGGGGCTC CGCTGACCGC GGCGGTCGCC
GTCGCCGATG TCGCCGAGGT GCCGACGGCG GTCGCGCGCA CGGCTGAGAT CGTCGATCTG
GTGCGGGCGA CGGGACGGCA GCCGGGGCTG TATCGGTTGG CGGACGTGCT GCTCGACTAC
CAGCTCAGCC GTCCCTCGGC GGCGTTGCCG GCGCTCGCGG CGCGGCTGGA GCCGGTGGCT
CAGAAGCCTG AGTTGCTGAC CACGTTGCAG ACGTACCTCG GGGTGGATCG CGATCGGCGC
GCGACGGCGA ATGCGCTGCA CGTCCATCCC AACACGGTCG ACTACCGGCT GCGGCGCATC
AGTGAGCTGA CAGGCTTGTC GGCGCATCGG ACCGAGGATG TGGGCGAGCT GCATGCTTCG
TTGGTCGCGC GTCAGGCGTT GGGTGAGCGT TCGTAG
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| Protein sequence | MQTLRALINW TVTQTSAVDS VTDHKTTGDS AGPLRIAGRP VAADLRALAP DLSRRVLARL
LEELPVYANL PGEEVAGDIA EIVQHSVRMF ADAIEARRVP DETELAAQRR SAQRRAEEGV
PLDAILAAYQ LGIAMVWSQV SAGATPGDHA DLREVLEILL EIQRRILCSV TESYLAARRT
IDSEEHSGRH ALMAALLSGA EPDGTVRAAP RYAVLTLRLE RHPDEDAAAP GVAARRKIRR
VREALDAFWD QPCLTAFRSD RGTVLMPLDD DAAVLDHEGL RALIVDAAGA AGAPLTAAVA
VADVAEVPTA VARTAEIVDL VRATGRQPGL YRLADVLLDY QLSRPSAALP ALAARLEPVA
QKPELLTTLQ TYLGVDRDRR ATANALHVHP NTVDYRLRRI SELTGLSAHR TEDVGELHAS
LVARQALGER S
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