Gene Caci_3204 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_3204 
Symbol 
ID8334557 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp3532119 
End bp3532832 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content70% 
IMG OID644956349 
Producthypothetical protein 
Protein accessionYP_003113952 
Protein GI256392388 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00563228 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.0203467 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACGCA TCTCCACCAA ACGCGGCCTG GCCGCGGGTC TGGCCACAGC CGCGGTCGCG 
GCCGGGATCG CCGCCCTGGG AACCGGCGGC AGCGCCGCGG CCGACACCAC CGCGACCTCC
GCGGTGTCGG CCGGGCCCGC CACCTACAGC CAGGCGGTGC CGACCGGCCA GCCCTCGCAG
TACAGCTCGC CGCTGGAGCG CTGCGCCAAC GGCGTCGACC ACCCGCTCAG CGGCGCGAAC
CCGATCCTGG CCGAGCCGCT GACCACGCAG TTCAGCAGCA ACGTCGGGCT GTCGGAGGCG
GTGTCATACA GCGGCGACCA GTGGTACGGG AACTGGACGT TCACGTTCAC CAACACCTCT
TCCGAGACGC TCGCGACGGA CTGCGCCGTG CTGATCTGGC GCGCGCCGTC GAGCTCTGAC
AACCACGCGT ACACGGCCTC GGTGGCCTAC GGGCACCCGC AGCAGGACTA CCTGGAAGTG
CCGCGCGGGG ACGGGACGTC GTTCTACGTC GCGCGGCTGG GCTTCCACGA CGTGCCGCTG
AACCAGCGCC AGGTCGGGCC GGGGCAGAAG TTCACGTACA CCTGGGGCGG GGTGCCGAGT
ACGGCGATCA CGACCCAGCA GATCCGGGAT TCGCTGCGGT TCACGGCGGA CCTGAACCTG
AGTGGGAACC AGAGCATGGT GCTGCACTAC GGGACGGACC GGCTGACGAA CTGA
 
Protein sequence
MQRISTKRGL AAGLATAAVA AGIAALGTGG SAAADTTATS AVSAGPATYS QAVPTGQPSQ 
YSSPLERCAN GVDHPLSGAN PILAEPLTTQ FSSNVGLSEA VSYSGDQWYG NWTFTFTNTS
SETLATDCAV LIWRAPSSSD NHAYTASVAY GHPQQDYLEV PRGDGTSFYV ARLGFHDVPL
NQRQVGPGQK FTYTWGGVPS TAITTQQIRD SLRFTADLNL SGNQSMVLHY GTDRLTN