Gene Caci_3203 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_3203 
Symbol 
ID8334556 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp3531501 
End bp3532025 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content69% 
IMG OID644956348 
Producthypothetical protein 
Protein accessionYP_003113951 
Protein GI256392387 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00415291 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0107564 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGCTG CACTCCTGGG TTTGCGCGGC CGGGCTCTCG GATGGTGGGT GCTGCTGGCG 
GCGGTGGTTG TGGTGGTCGC GGTCAATGCG GCGTTGGCCA ATTGGTCGCG GGGGTCTACG
TCGCACGGGT CTGCGTCGGC CTCGGCGGTT TCCGGACCGT CGATGGTGCG GGCGCGGTCG
GTGGCCACGC AGGAGTTCGG GCTGTTGTCC GGCGGCGGGT GGGGGCAGGC GTGGGGGCTG
TGGTCGGCGG CGGGGAAGGC TGCGCTGAGT GAGGCCGACT TTGTGCAGCT GAACACGGAG
TGCCGGCCGG CTTTGGGCGA GCCGTACATC GTTGACCTCG CAACGGATCT GGACGCGACG
ACCGTGCGGA TCGAATGGCA TCAGGGTTCG ACGACAGGCA GCGGCACGGT GGTTTACGAG
GGCGGGGCGT GGAAGTTCCA GCCTAATGCG CAGACGCTGG CGGCGTACCG GGGCGGCGTC
GTGACAGTGG TGGCCGAGCG GAAGGCGGCA GGGGAATGTC ACTGA
 
Protein sequence
MRAALLGLRG RALGWWVLLA AVVVVVAVNA ALANWSRGST SHGSASASAV SGPSMVRARS 
VATQEFGLLS GGGWGQAWGL WSAAGKAALS EADFVQLNTE CRPALGEPYI VDLATDLDAT
TVRIEWHQGS TTGSGTVVYE GGAWKFQPNA QTLAAYRGGV VTVVAERKAA GECH