Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_3203 |
Symbol | |
ID | 8334556 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 3531501 |
End bp | 3532025 |
Gene Length | 525 bp |
Protein Length | 174 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644956348 |
Product | hypothetical protein |
Protein accession | YP_003113951 |
Protein GI | 256392387 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.00415291 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.0107564 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCGCTG CACTCCTGGG TTTGCGCGGC CGGGCTCTCG GATGGTGGGT GCTGCTGGCG GCGGTGGTTG TGGTGGTCGC GGTCAATGCG GCGTTGGCCA ATTGGTCGCG GGGGTCTACG TCGCACGGGT CTGCGTCGGC CTCGGCGGTT TCCGGACCGT CGATGGTGCG GGCGCGGTCG GTGGCCACGC AGGAGTTCGG GCTGTTGTCC GGCGGCGGGT GGGGGCAGGC GTGGGGGCTG TGGTCGGCGG CGGGGAAGGC TGCGCTGAGT GAGGCCGACT TTGTGCAGCT GAACACGGAG TGCCGGCCGG CTTTGGGCGA GCCGTACATC GTTGACCTCG CAACGGATCT GGACGCGACG ACCGTGCGGA TCGAATGGCA TCAGGGTTCG ACGACAGGCA GCGGCACGGT GGTTTACGAG GGCGGGGCGT GGAAGTTCCA GCCTAATGCG CAGACGCTGG CGGCGTACCG GGGCGGCGTC GTGACAGTGG TGGCCGAGCG GAAGGCGGCA GGGGAATGTC ACTGA
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Protein sequence | MRAALLGLRG RALGWWVLLA AVVVVVAVNA ALANWSRGST SHGSASASAV SGPSMVRARS VATQEFGLLS GGGWGQAWGL WSAAGKAALS EADFVQLNTE CRPALGEPYI VDLATDLDAT TVRIEWHQGS TTGSGTVVYE GGAWKFQPNA QTLAAYRGGV VTVVAERKAA GECH
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