Gene Caci_3201 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_3201 
Symbol 
ID8334554 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp3528903 
End bp3529730 
Gene Length828 bp 
Protein Length275 aa 
Translation table11 
GC content71% 
IMG OID644956346 
Productprotein of unknown function DUF574 
Protein accessionYP_003113949 
Protein GI256392385 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.218892 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0115553 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGCGA TCGACGTTGC GGAGCTGGCT TTGAGTCTTC CGGACATTGA CCCCTCCCAG 
CCAAGTCCGG CCCGCATCTA CGACTTCTGG CTCGGTGGCA GCCAGAACTT CGAGGCGGAC
CGCGAAGCCG GCCGCCGTGC CGCCGACGCC ATGCCCACGC TGGTCGGCGC GATCCGGGCC
AACCGCGCCT TCCTCGGCCG CGTGGTCCGC CACCTGGCTG GCACGGTCGG CGTCAGCCAG
TTCCTGGACC TGGGTTCCGG CGTGCCGACC GCGGGCAACG TCCACGAGGT CGCGATGGAG
GTCAACCCCG AGGCGCGCGT CGTCTACGTG GACGTCGACC AGGTCGCCAT CGCGCACGCC
CGCATGCTCC TGTCGCAGAC CCCCAACGCC GTGGCGATCC TGGCGGACCT GCGCCGTCCC
GACAGCGTCC TGGCGCACCC GCTTCTGGCG CAGACCCTGG ACCTGTCCAA GCCGGTCGCC
ATCTTGATGA ACGCGGTCCT GCACTTCGTC CCCGACGAGG ACGACCCGGC CGGCATCGTC
GCCGCCTACG TCGACGCCTC CGCCCCGGGC AGCTACCTGG CCTTGTCGCA CGCCGCCCCG
GACCTGGCCC ACCCCGGCGA ACAGCAGCAG ATGCTGGACG ACTACCAGCG CTCCACGCGC
GTACCGTTCA TCAACCGCGA GCCCGAAGTG ATCGAGGGCT GGCTGTCCGG CCTGGAGATC
CAGCCGCCCG GGATGGTCAC CGTCGACCAG TGGCAGCCCG AGCCGAACAC CGTCGAGACG
CCGATCCTGC GCACCTACGG CGTCCTGGCG CGCAAGCCGA CGTCCTAG
 
Protein sequence
MDAIDVAELA LSLPDIDPSQ PSPARIYDFW LGGSQNFEAD REAGRRAADA MPTLVGAIRA 
NRAFLGRVVR HLAGTVGVSQ FLDLGSGVPT AGNVHEVAME VNPEARVVYV DVDQVAIAHA
RMLLSQTPNA VAILADLRRP DSVLAHPLLA QTLDLSKPVA ILMNAVLHFV PDEDDPAGIV
AAYVDASAPG SYLALSHAAP DLAHPGEQQQ MLDDYQRSTR VPFINREPEV IEGWLSGLEI
QPPGMVTVDQ WQPEPNTVET PILRTYGVLA RKPTS