Gene Caci_3198 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_3198 
Symbol 
ID8334551 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp3526162 
End bp3527121 
Gene Length960 bp 
Protein Length319 aa 
Translation table11 
GC content70% 
IMG OID644956343 
ProductABC-3 protein 
Protein accessionYP_003113946 
Protein GI256392382 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1108] ABC-type Mn2+/Zn2+ transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.0525861 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCAGCA TGTTCAGCCA CCCGTTCATG GTCTACGCGC TGCTCGGCGG GACCGGCATC 
GCGGCGGCCT GCGGGGCGGT CGGGTTCTTC CTGGTGCTGC GCGCGCAGGT GTTCACCGGG
GACGCGCTGT CGCATGTGGC GTTCACCGGA GCGCTGGCCG CGCTGGCGTT CGGCGTCGAT
CTGCGCATCG GCCTGTTCAC CGCGACGATC GCCGTGGCGC TGCTGCTCGG CGCGCTGGGG
CGGCGCGGAC GGGCCGACGA CGTGGTGATC GGCAACGTCT TCGCCTGGAT TCTCGGGCTC
GGCGTCTTCT TCCTCACGAT GTACACGACC AACCGCTCGG GCTCCGGTTC CGGCAACGGC
TCGGCGACGA TCAACGTGCT GTTCGGCTCG ATCCTCGGTC TGTCCTCATC GCAGGCGCAG
ACCGCGTTGT GGATCGGGCT CGGTGTGGTC GCGGTCCTGC TGTTCATCGC CCGACCGCTG
CTGTTCGCGA CGTTGGACGA GGCTGTGGCC GCCGCGCGCG GCGTGCCTGT CAGGGTTCTG
GCATTCGTGT TCCTGGCTCT GGTCGGCGCG GCGACTGCGG AGGCGACGCA GGCGGTCGGT
GCGTTGCTGC TGCTGGGGCT GGTCGCGGCG CCTGCCGGTA CCGCGCTGGT GCTGACCGAC
CGGCCGTTCC GCGGGCTGGG CGTGGCGATC GTGCTGGCGG TGGGGGAGAT GTGGGTCGGG
TTGACGCTGG CCTATCTCGT GCCGCGGATG CCGCCGAGCT TCTCCATCAC GGCGGTCGGG
ACTTTCGCGT ACGCCGCCGC CATGATCTAC CGGTCGGTCA ACCGACGCCG CGCGGCGGTT
CCAGCCTCAG CTGCCTCGAC CGCCAGCCCC GTTTTCCCAT CCCCTTCGCG TGTACGTCTG
CGCCCCAGCA CCGCCAGCAC CACCACGCAC AACACCGCCG CACCCCACGC GAAGTACTGA
 
Protein sequence
MISMFSHPFM VYALLGGTGI AAACGAVGFF LVLRAQVFTG DALSHVAFTG ALAALAFGVD 
LRIGLFTATI AVALLLGALG RRGRADDVVI GNVFAWILGL GVFFLTMYTT NRSGSGSGNG
SATINVLFGS ILGLSSSQAQ TALWIGLGVV AVLLFIARPL LFATLDEAVA AARGVPVRVL
AFVFLALVGA ATAEATQAVG ALLLLGLVAA PAGTALVLTD RPFRGLGVAI VLAVGEMWVG
LTLAYLVPRM PPSFSITAVG TFAYAAAMIY RSVNRRRAAV PASAASTASP VFPSPSRVRL
RPSTASTTTH NTAAPHAKY