| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_3185 |
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| Symbol | |
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| ID | 8334538 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 3514427 |
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| End bp | 3515533 |
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| Gene Length | 1107 bp |
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| Protein Length | 368 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644956331 |
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| Product | RNA polymerase factor sigma-70 |
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| Protein accession | YP_003113934 |
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| Protein GI | 256392370 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02960] RNA polymerase sigma-70 factor, TIGR02960 family |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.0418907 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGAGACGG ACACCGAGAC GGGCACCGTG ACGCACACCG AGTCAGACGC CGTGACCGAC
CCGGCGGACT TGATCGCCCG CGCCCGGGCC GGCGACCACC ACGCGTTCCG CGACCTGGTC
CAGGGCCACT CCCACGAGTT GCAAGTGCAC TGCTACCGCA TCCTGGGATC CCTGCAGGAC
GCCGAGGACG CACTCCAGGA GACCCTCGTG TCCGCCTGGC GTAATCTCGG CGCGTTCGGC
GAGCGGTCCT CGCTGCGGAC CTGGCTGTAT CAGATCGCGA CCAACCGCTG CCTGAGCATG
CTGCGCGCCG ACAGCCGGCG CCCCCGCACC GCGCATCCGC ACCCTGAGGC CGCCCTACCC
GAGCCCACCG GCGCCGGCGA CGCCCCGCCC TGGCTGGAGC CCTACCCCGA CGTGCTGCTC
GACCATCTCG TCGACCGGCG CCCCGGACCG GAGGCCCGCT ATGAGACCAC CGAGGCCATC
TCCCTGGCCT TCATCACAGC CCTGCAGCTA CTGCCTCCGC GCCAGCGCGC CGCGCTCGTA
CTCCGCGACG TCCTGGGCTA CCGCGCCGCC GAGGTCGCGC AGATGCTGGA CTCCACGCAG
GAATCGGTGA GCAGCGCCCT GAAACGCGCT CGCGCGACGG TCGACAACCA CCTCAACCAC
CTCGCCGAAT CCGGCGGCAG CAGCAGCGGC GCCACCATCA CCGCCAGCCC CGGCGCCCGC
AGACCCGCCG CCGAACACCG CCTCGTCGCC CGCTTCACCG ACGCCATGGA ACGCGCCGAC
CTGGACGCCC TGATCGACCT GCTCGTCACC GACGTGAAGC TCTCCATGCC CCCCGCCCTG
ATCGAGTTCC GCGGCATCGA GACGGCGCAC CGCATCTTCG TCGCCACCGT CTTCCGCCCC
GGTCGCAGCT ACCGGGTGGT CCCCACGCAC GCCAACGGCC AGCCCGCCTT CGGCCTGTAC
CTGGCCGATG GGCACGCCGG CGTCCACCGC GCGCACTGCT TCCTGGTCCT CACCACCGCC
GGCGACCAGA TCACCGCCAT CACCAGCTTC ACCACCGACG TCATGGCGCG CTTCGGAATG
CCCCGAACCT TCCCCGAGCC AGATTGA
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| Protein sequence | METDTETGTV THTESDAVTD PADLIARARA GDHHAFRDLV QGHSHELQVH CYRILGSLQD
AEDALQETLV SAWRNLGAFG ERSSLRTWLY QIATNRCLSM LRADSRRPRT AHPHPEAALP
EPTGAGDAPP WLEPYPDVLL DHLVDRRPGP EARYETTEAI SLAFITALQL LPPRQRAALV
LRDVLGYRAA EVAQMLDSTQ ESVSSALKRA RATVDNHLNH LAESGGSSSG ATITASPGAR
RPAAEHRLVA RFTDAMERAD LDALIDLLVT DVKLSMPPAL IEFRGIETAH RIFVATVFRP
GRSYRVVPTH ANGQPAFGLY LADGHAGVHR AHCFLVLTTA GDQITAITSF TTDVMARFGM
PRTFPEPD
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