Gene Caci_3181 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_3181 
Symbol 
ID8334534 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp3510676 
End bp3511185 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content75% 
IMG OID644956327 
Producthypothetical protein 
Protein accessionYP_003113930 
Protein GI256392366 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.00169652 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACGTCGC AGAAGTCCAC CCAGACGATG AAGCCCGCGA CAGCGGCGAA GAAGCTGGGC 
GTATACCTTG AGGCCACCCC CGAAGCGTTC CAGGAGGGGG TCGTCTCCCG CGACGAGCTC
GACGCGCTCC AGGCCGACCC GCCGGAGTGG CTGCGCGACC TGCGCCGCGA CGGACCGCAC
CCGCGCCCCG TGGTCGCGGC CAAGCTCGGC ATCTCCATCT CGGGCCTGTC CCGCGGCGGC
GTCGAGGAGC CGCTGACCAC CGCGCAGATC GACGCCCTCA AGGCCGACCA GCCGGAGTGG
CTGCGCAGCG AGCGCGCGAT CCAGGCCGAG GTCCGCCGCG AGACGGTGCG GGTCAAGGAG
AAGGCCGCCG CCGAGGAGAA GAAGGCCGCG AACAAGGCGG CGGCGCCCCC GCAGCGCCCC
TCCGCCCGCT CCGGCACGCA CGACCCGCGG GGCGCGAAGG GCAAGGGCAC GCGCGGTACG
CGGGGCGGCA CGACGCGCCG CGGGCGCTGA
 
Protein sequence
MTSQKSTQTM KPATAAKKLG VYLEATPEAF QEGVVSRDEL DALQADPPEW LRDLRRDGPH 
PRPVVAAKLG ISISGLSRGG VEEPLTTAQI DALKADQPEW LRSERAIQAE VRRETVRVKE
KAAAEEKKAA NKAAAPPQRP SARSGTHDPR GAKGKGTRGT RGGTTRRGR