Gene Caci_3162 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_3162 
Symbol 
ID8334515 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp3479712 
End bp3480890 
Gene Length1179 bp 
Protein Length392 aa 
Translation table11 
GC content62% 
IMG OID644956309 
Producthypothetical protein 
Protein accessionYP_003113912 
Protein GI256392348 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0330562 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.0371892 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCTTCC GTTCCGGCTT CACCCTCGTC CGATTCCTCA CGGCGGCGCG CGAGATGACC 
AGCGAGGACC TGGTCCGTCA CCATATCGAC GCTGCCCTTG CATACACGAA CAGCGATAGG
TCGAAGTACC AAAGAGGGCG GCCACTCGTC AACCACATCG AGGCCGCCTC ACGAGCAGCT
GCGGCCATGG ATGACAACGC ATTGGCTGAG CGTCTGGCCG GTTGTGCGGA GTACGCAGCA
GGCACGATCC ACCTGACGCT CCTCGAAACC AGATGGGATC CCGAGGCCAG GGCTTCTCAC
GAGAAGTACA TGCGGCTGAA TCTCGAAGTC GGGCTGGTGC GGTGTGCGGA AATCCTCGAC
GAGTATCTTA AAGACCAGCC CCACGCCAGC GGCCACGAAA TGCACCAGTG GCTCGTCCAC
GTGACAGGAG CCATGGGAGC CTGGACCATC GGCGAAGGCC GACTCCCGCG GGTCAAGCTT
CCCCGCTATA GCGCCGAACA CCTTGCGTGG TTCCGGGACA TTCGGCTCGT TCTGAACGAA
CAGCCCGATA GCTCGGATCT GACGCCGGAG ATCGCCGAGC AACTCGCAAA CGTCCCAGGC
GCCGAGCTTG TGGCGCGAGC TGTGCAATGG CACAAGCGAA AGGGCGCGCT TGACCGCCTA
CGCGCCGTGG TAGAGGACCC TGCGAGCAGC GAAAAGGAAA TCCACGCCGA ACTGAAGCAA
CAGGCATGGA TCTTCGGTGG ACGCTATGTC GACGAACTCA CCCGCCGCCG GCTCACCACG
TTCGATGAAC TCGACATCCC GCTGATACGA GGCGACGGCT CCCTCCATGT GGTCGAGTTG
AAGAAGGCGA ATCAGCGCAA GCTTGTCACG TCCACGCGCT CGCACTGCGC AGTCGGCTCT
GTCGTCCACG ACGCTGTGAT GCAGGCAGCC AACTACCTCC GCTCTCTGGA CGAGAACCGG
GCCGCGATAC TTGCAGACCA TGGGATCGAG TGTCGCCGCG CTTCAGCCAC GGTGCTCATC
GGTCACCCCG CTTTCGTCGA GGAAGCGTTC CGTGCCAACG AGATCTCCGC AGCGCTTCGG
ACCTACAACA CTGTGCTGAA CCGGATCGAG GTCATGACCT ACGCGGAGCT CATCGACGCG
GCCGAGCGCT CCCTCGCTCT CAACGACGCG GAAATGTGA
 
Protein sequence
MGFRSGFTLV RFLTAAREMT SEDLVRHHID AALAYTNSDR SKYQRGRPLV NHIEAASRAA 
AAMDDNALAE RLAGCAEYAA GTIHLTLLET RWDPEARASH EKYMRLNLEV GLVRCAEILD
EYLKDQPHAS GHEMHQWLVH VTGAMGAWTI GEGRLPRVKL PRYSAEHLAW FRDIRLVLNE
QPDSSDLTPE IAEQLANVPG AELVARAVQW HKRKGALDRL RAVVEDPASS EKEIHAELKQ
QAWIFGGRYV DELTRRRLTT FDELDIPLIR GDGSLHVVEL KKANQRKLVT STRSHCAVGS
VVHDAVMQAA NYLRSLDENR AAILADHGIE CRRASATVLI GHPAFVEEAF RANEISAALR
TYNTVLNRIE VMTYAELIDA AERSLALNDA EM