Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_3160 |
Symbol | |
ID | 8334513 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 3476181 |
End bp | 3477380 |
Gene Length | 1200 bp |
Protein Length | 399 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644956307 |
Product | transposase IS116/IS110/IS902 family protein |
Protein accession | YP_003113910 |
Protein GI | 256392346 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3547] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.846497 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.201189 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTACGACA CCAGCGGCAT CGGCGTCTTC CTCGGTTTGG ACGTCGGCAA GGGCGAGCAC CACGGGCACG GGCTGACCCC GGCCGGAAAG AAGGTGTTCG ACAAGCAGTT GCCGAACAGC GAGCCGAGGC TGCGGCAGGT GTTCGACAAG CTCAAGGCCA AGTTCGGTAC CGTGCTGGTG ATCGTGGACC AGCCGGCGAA CATCGGGGCG CTGCCGCTGA CCGTGGCGCG GGACTGCGGC TGCGAGGTCG CCTACCTGCC GGGTTTGGCG ATGCGCCGGT TGGCCGACAC CTACGAGGGC GAGGCCAAGA CCGACGCCCG CGACGCGTTC GTCATCGCCG ACGTCGCCCG CACCAACCCG CGCACCCTGC GGCAGATCAC CGTCACCGAC CAGACCGAGG CCGAGCTGGC CATGCTCGTC GGGTTCGACG ACGACCTGGC TGGCGAATCC ACCCGCACCT CCAACCGGCT GCGCGGCCTG CTCGCCCAGA TCCACCCGTC CCTGGAGCGC GTCCTCGGCA AGCGGATCCG CCACCCGGCC GTCCTGGAAC TGCTGAGCCG CTACGGCTCC CCGCAGCAGC TGCACCAGGC CGGAGGCGAC CAGATCGCGG CGGTCCTGAA GCCGAAGGCG CCGCGGATGG CCGCCCGCCT GGCCGCTGAG ATCACCACCG CGCTGGCCGA GCAGACCGTC GTCGTGCCCG GCACCACCGC AGCCGAGGTC ATCGTGCCCT CGCTGGCCCG GCAGCTGGCC GAGATCCTCA CCCAACGCGA CGCGCTGGAG GGCCGGCTGG CAGCCCTGCT GGAGGCCCAC CCTCTTCACC GACTCCTGAC CTCCATGCCC GGCGTCGGGG TCAGGATCGC CGCCACAGTG CTGATCACCA TCGGCGACGG CCGCACCTTC CCCGACGCCG ACCACCTGGC CTCCTACGCC GGACTGTCCC CGGCCACCAA ATCCTCCGGC TCCTCGATCA AAGGCGAACA CGCACCCAAG CGCGGAAACC GGCAGCTCAA ACGGGCCATG TTCCTGTCCG CGTTCGCCGC CCTGCACGAC CCCGCCTCCC GCGACTATTA CGACCGGCAC CGCAACAGCG GCAAAACCCA CACCCAGGCC CTGCTACGCC TGGCCCGCCG CCGGATTACC GTCCTGTTCG CCATGCTCCG CGACGGCTGC CTCTACGAAT CCCGCCCGGC ATCAGCATGA
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Protein sequence | MYDTSGIGVF LGLDVGKGEH HGHGLTPAGK KVFDKQLPNS EPRLRQVFDK LKAKFGTVLV IVDQPANIGA LPLTVARDCG CEVAYLPGLA MRRLADTYEG EAKTDARDAF VIADVARTNP RTLRQITVTD QTEAELAMLV GFDDDLAGES TRTSNRLRGL LAQIHPSLER VLGKRIRHPA VLELLSRYGS PQQLHQAGGD QIAAVLKPKA PRMAARLAAE ITTALAEQTV VVPGTTAAEV IVPSLARQLA EILTQRDALE GRLAALLEAH PLHRLLTSMP GVGVRIAATV LITIGDGRTF PDADHLASYA GLSPATKSSG SSIKGEHAPK RGNRQLKRAM FLSAFAALHD PASRDYYDRH RNSGKTHTQA LLRLARRRIT VLFAMLRDGC LYESRPASA
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