Gene Caci_3140 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_3140 
Symbol 
ID8334493 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp3448073 
End bp3449101 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content70% 
IMG OID644956287 
Producthypothetical protein 
Protein accessionYP_003113890 
Protein GI256392326 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGACCC AGATCGGGAG CAGCACGCTC CCTCCGTTCA CCGTCTCCGC CCCCGGGGTC 
CAGACGGCGC TGGCGCAGTT CCAGTCCATG ACCGGCAGCT CCAATTCGAC GGTCAGCGCC
GTGGAGACGC TGGTGCTGGA CGCGATGAGC TTCGCCGGCA TCGGCTCGGC GGTCGGCAGC
GCGAACAACA GCCTGCACAC GCAGCTGGTC GGCAGCCTGG GCAAGGTCGT CAGCTTCGTG
GAGACGCTGA CCGGCGCGAT CACCACCGTG CTGAAGGACT ACGAGGCGCT GGATCAGAAG
ACGGCTGACA GCTACAAGAG CCTGTCGCTG GCCGGCGGGA CCACGGCGCA GACCGCCGCG
CAGACGACCG GGACGACGGC GACCACGCCC GCGACGACCC CGGCCCATCC GACGACAACT
CCGGCGACCC CCGCCGCCGG CACGCACCAG CCGCTGCCGA ACGGCTTCGT GACGCAGCTG
ATGCAGTCCG AGGGCTCGCA CGGCAACCAG GGCGGCGTCG ACGAGGTCTA CGGCTTCCGC
CAGAGCAGCC ACAACGGCTA CGACCAGATC ATGGCCGCCC GGCAGCAGTA CGGCCAGGGC
AGCCCGCAGG AGCAGGCGGT CGTCGCGGAC CTGCTGAGCC GGCACGCGGA CCAGGCCGGC
GCGCAGGACT TCACCGACCC CGGCATCCGC GCCGCCATCG CCTCCAGCGC CCACATGCGC
GGCATCGGCG GCACCCGGGC GATCCTGAAC TCGATGGCCA CCGGCGACAC CCCGACGACA
TCAGCGGGCT CGGTCTCAGC GGACAACATG GCCGCCCTGC AGCAGATGAC ACCGGACCAG
TTCCAGCAGT CGTTCCACGA CGCGCGCATC ACCTACGACC AGACGGTCTA CGGCAACACC
ACCACCCACG TCCACGGCCA GGCCATGACC TGGTGGCAGG CCTACGGCAA CGGTCTGACC
ACGCGGTACA ACCGCGAACA GACCCAGTTC GAGGGCTATT CGCAAGCTGC GCAGGGCGGC
GGGCAGTAA
 
Protein sequence
MSTQIGSSTL PPFTVSAPGV QTALAQFQSM TGSSNSTVSA VETLVLDAMS FAGIGSAVGS 
ANNSLHTQLV GSLGKVVSFV ETLTGAITTV LKDYEALDQK TADSYKSLSL AGGTTAQTAA
QTTGTTATTP ATTPAHPTTT PATPAAGTHQ PLPNGFVTQL MQSEGSHGNQ GGVDEVYGFR
QSSHNGYDQI MAARQQYGQG SPQEQAVVAD LLSRHADQAG AQDFTDPGIR AAIASSAHMR
GIGGTRAILN SMATGDTPTT SAGSVSADNM AALQQMTPDQ FQQSFHDARI TYDQTVYGNT
TTHVHGQAMT WWQAYGNGLT TRYNREQTQF EGYSQAAQGG GQ