| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_3138 |
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| Symbol | |
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| ID | 8334491 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 3445114 |
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| End bp | 3446205 |
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| Gene Length | 1092 bp |
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| Protein Length | 363 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644956285 |
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| Product | RNA polymerase factor sigma-70 |
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| Protein accession | YP_003113888 |
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| Protein GI | 256392324 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02960] RNA polymerase sigma-70 factor, TIGR02960 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCATCG TGACGACCAT GACGACCATG ACGATGACGA CGACCACGAC ACCCGTGACA
CCCGAGGCGG ACCCACCGAC GGCAGGGAGC GAGATGCGGG TCGAGGACGA CTTCGTCCGG
CTGGCCGACC CCTTCCGGCC GGAGATCCTG GCGCACTGCT ACCGGATGCT CGGCTCCATC
CACGACGCCG AGGACCTGGT CCAGGAGACC TACCTGCGCG CCTGGCGCTC CTACGAGGGC
TTCGAGGGAC GCGCGTCCCT GCGCACCTGG CTGTACCGCA TCGCCACCAA CGCCTGCCTG
ACCGCGCTGG AGCACCGCGC GCGGCGTCCC CTGCCGGCCG GCATCGGCAC CCCGCACACC
GACCCCGAGG GCGATCTGAG CGCGATCCCG CCGGAGATCA CATGGCTGCA GCCGTTCCCG
GACGTGCTGC TGGACACCGG GGTGTCCGCC GCGGCCGGCG CCGACCCGGC CTCGGTCGTC
GCGGCCCGCT CCGGCCTGCG CCTGGCGCTG GTCGCGGCCC TGCAGTACCT GCCGCCCCGC
CAGCGCGCGG TCCTGATCCT GCGTGACGTC CTGGGCTGGC GCTCCGCCGA GGTCGCCGCG
CTGCTGGACC TCACCGTGGC GGCGGTCAAC AGCCTGCTGA AGCGGGCCCG CGCCCGGCTC
GCGGAGGTCG CCCCGGACGT CGAGGACGTC GCCGAGCCCA CGCAGGCCGA GCAGCGCGAG
ATCCTGGACC GCTGGGCGAA GGCCTTCGTC GAAGCCGATG TCGACACCCT GATGAAGCTG
CTGACAGAGG ACGCGGTCTA CGAGATGCCG CCGCAGCCGA TGTGGTTCCG CGGCGCGCCG
TTCCTGCGGC GCCTGCTGAC CTTCCGCCTC GGCATGCACG GCAAATACCG CAAGATGATC
CCGATCCGCG CCAACGGCCA GCCCGCGTTC GCGGTGTACT CCGGCGACGA CGACCGCCTC
CTGGCCGCCG AGTCGGTACA GGTGCTGACG CTGCGCGGCG GGAAGGTCGC CCGGGTGACG
ACGTTCCGGA CGCCGGGACT GGTCGCGGTC GCGGGCTTCC CGATGGAGAC GGAGCTGGAG
AACGAGGACT GA
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| Protein sequence | MTIVTTMTTM TMTTTTTPVT PEADPPTAGS EMRVEDDFVR LADPFRPEIL AHCYRMLGSI
HDAEDLVQET YLRAWRSYEG FEGRASLRTW LYRIATNACL TALEHRARRP LPAGIGTPHT
DPEGDLSAIP PEITWLQPFP DVLLDTGVSA AAGADPASVV AARSGLRLAL VAALQYLPPR
QRAVLILRDV LGWRSAEVAA LLDLTVAAVN SLLKRARARL AEVAPDVEDV AEPTQAEQRE
ILDRWAKAFV EADVDTLMKL LTEDAVYEMP PQPMWFRGAP FLRRLLTFRL GMHGKYRKMI
PIRANGQPAF AVYSGDDDRL LAAESVQVLT LRGGKVARVT TFRTPGLVAV AGFPMETELE
NED
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