Gene Caci_3119 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_3119 
Symbol 
ID8334472 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp3429083 
End bp3430279 
Gene Length1197 bp 
Protein Length398 aa 
Translation table11 
GC content74% 
IMG OID644956266 
Productlipid-transfer protein 
Protein accessionYP_003113869 
Protein GI256392305 
COG category[I] Lipid transport and metabolism 
COG ID[COG0183] Acetyl-CoA acetyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCGCC TGGACTCGGT CGCCGTCGCC GGCGTCGGCA TGCACCCCTG GGGCGCGTGG 
GGGAAATCCT TCGTCGAATA CGGCACGGTC GCAGCGCGCG CCGCGCTGGC CGACGCCGGC
CTCGGCTGGC GCGACGTGCA GCTGGTGGTC GGCGGCGAGA CGATCCGCAA CGGCTACCCC
GGCTTCGTCG CCGGCTCGGC GCTGTCCCAG GCGCTGGGCT GGCAGGGCGC ACCGGTCGCG
AGCTGCTACG CGGCATGCGC CACCGGCGCG CAGGCGCTCG CCACCGCCCG CGCGCACATC
CTCGCCGGCT TGGCAGACGT GGTCTTGGTA GTCGGCGCGG ACACCACCCC GAAGGGGTTC
TTCGCCCCGG TCGGCGGCGA CCGCCCCGAC GACCCGGACT GGCTGCGCTT CCGCCTGCTC
GGCGCGACGA ACCCGGCGTA TTTCGGCCTC TACGCGCGCC GCCGGATGGC CCTGCGCGGC
TCGACGGAGG CGGACTTCGC GGCGGTGAAG GTAAAGAACG CCCGCGCGGG ATCGCTGAAC
CCGAACGCGC GCTTCCGGGC GGAGGTGGAC GCCGAGACGG TCCTGAACTC CCCGATGGTG
AGCGACCCGC TGCGCCTGCT GCAGATCTGC GCGACCAGCG ACGGCGCGGC GGCGGTCGTG
CTGACCTCCG AGGACTACGC GCGCCGCGTG AACAAGGACG CGGTGCGCAT CCGCGCCGTC
TCGGCGGTGA CGCCGACGTA TCCGAGGACT GTCCCGGACT TCCCCTATCT GGCCTCGGAC
TCGATGGCGA CCACGCCGCC GGCGACGCGC ACGTTCCGCG AGTCGCTGGC GCACACGGCG
TACGAGGCCG CCGGGATCGG CCCGGAGGAC GTGGACCTCG CGGAGGTCTA CGACCTGACG
ACCGCGATGG AGTTGGACTG GTATGAGGAA ATCGGGCTGT GCGCCCCCGG CGAGGCCGAG
AAGCTGCTGC ACGAAGGCGC GACCGCACTC GGCGGCCGCG TCCCGGTCAA CCCGAGCGGC
GGCCTGAGCT CCTTCGGCGA GGCGATCCCG GCGCAGGCCA TCGCACAGGT CTGCGAACTG
GCGTGGCAGC TGCGCGGCGA CGCCGGCGCC CGGCAGGTCG AGGGCGCGCG GGTCGGCGTC
GCGGTGAACC AGGGGTTGTT CGGGCACGGG TCGGCGATCG TGGTGGGGCG GGCTTAG
 
Protein sequence
MSRLDSVAVA GVGMHPWGAW GKSFVEYGTV AARAALADAG LGWRDVQLVV GGETIRNGYP 
GFVAGSALSQ ALGWQGAPVA SCYAACATGA QALATARAHI LAGLADVVLV VGADTTPKGF
FAPVGGDRPD DPDWLRFRLL GATNPAYFGL YARRRMALRG STEADFAAVK VKNARAGSLN
PNARFRAEVD AETVLNSPMV SDPLRLLQIC ATSDGAAAVV LTSEDYARRV NKDAVRIRAV
SAVTPTYPRT VPDFPYLASD SMATTPPATR TFRESLAHTA YEAAGIGPED VDLAEVYDLT
TAMELDWYEE IGLCAPGEAE KLLHEGATAL GGRVPVNPSG GLSSFGEAIP AQAIAQVCEL
AWQLRGDAGA RQVEGARVGV AVNQGLFGHG SAIVVGRA