| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_3109 |
|---|
| Symbol | |
|---|
| ID | 8334461 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | + |
|---|
| Start bp | 3418476 |
|---|
| End bp | 3418961 |
|---|
| Gene Length | 486 bp |
|---|
| Protein Length | 161 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 644956256 |
|---|
| Product | 6,7-dimethyl-8-ribityllumazine synthase |
|---|
| Protein accession | YP_003113859 |
|---|
| Protein GI | 256392295 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0054] Riboflavin synthase beta-chain |
|---|
| TIGRFAM ID | [TIGR00114] 6,7-dimethyl-8-ribityllumazine synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCGGAG CGGGAGCGCC GGCCATCAGC ATCGAGGGTG GCGCCGACCT CAAGGTCGCG
GTGGTGGCCG CGCAGTGGCA CACCCAGGTC ATGGACGGCC TGGTGGCCGG GGCCGAGAAG
GCGCTCGCGG AGATCGGCGC GGAGCACGAC CTGTTCCGCG CGCCGGGCTC CTTCGAGCTG
CCGGTGCTGG CCAAGGCGCT GGCCGAGGCG GGTTCGGGCT ACGACGCGGT GGTGGCCCTC
GGCGTCGTCA TCCGCGGCGG CACCCCGCAC TTCGAGTACG TGTGCGCCGC CGCCACCGAC
GGGCTGAACC GGGTCGCCCT GGACACCGGC ACGCCGATCG GCTTCGGCCT GCTCACCTGC
GACACCGAGC AGCAGGCGCT GGACCGCGCC GGCCTGCCCG GCTCGCGGGA GGACAAGGGC
CGCGAGGCCG TGGAGGCCGC CGTGGCGACC GCGCTGGTCC TGAAGAAGAT CGAGGCGAAG
CGGTGA
|
|---|
| Protein sequence | MSGAGAPAIS IEGGADLKVA VVAAQWHTQV MDGLVAGAEK ALAEIGAEHD LFRAPGSFEL
PVLAKALAEA GSGYDAVVAL GVVIRGGTPH FEYVCAAATD GLNRVALDTG TPIGFGLLTC
DTEQQALDRA GLPGSREDKG REAVEAAVAT ALVLKKIEAK R
|
|---|
| |