Gene Caci_3101 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_3101 
Symbol 
ID8334453 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp3408245 
End bp3409723 
Gene Length1479 bp 
Protein Length492 aa 
Translation table11 
GC content66% 
IMG OID644956248 
ProductPeptidase M1 membrane alanine aminopeptidase 
Protein accessionYP_003113851 
Protein GI256392287 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0308] Aminopeptidase N 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.625584 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGCTG GGGTGTCCGG GCTAAGGCGT GCGGGCTTGT GGGTGCCGTT GGGCGGGGCG 
GCGATGTCGG TGGTGGCGGC GGCGTTCATA GCCGCACCGT TGGGTCCGCA TCCGCTTCCG
CTTCCCAGCC AGATAGAGGG AGCCTCTATA GACAGCTCCA CTGCGGTCGG GGACTACGCG
GCGACCGGTA AGAGCGTTGT GGCGGCGGCG CACGGCGATC CCACCGCCCC TGCCGACGCT
CGCTATACAG TGTCGCTAAA GAGCGATGAC ACTGGGCACT CCTGGAGCGG CACGGAGCAG
ATCTCCTTTG CGAACTCCGG CACTGTCCCG ATCACAGAGT TCTGGATACG TCTGTGGGGC
AACGGTGACG CCAGCTGCGG AGCCACCCAG CCGGAACGCA TCAGTGATCT GAGTGGCGGC
TCCGTCGCGG AGACACAGCA GAACTGCACA GCGTTCCGCA TAGTGCTCGA CAGGGCGTTG
GCACCAGGCG CGAGCGCGCA GGTCGGATTC AATCTGGCTA TAGACGTCCC CACCCGGCGC
GACCGGTTCG GGGTGAACGG AGTCGACACC TACGTGGGGA ACGCCCTAGC GGTTCTCGCG
GTCAAGGACG AGCACGGCTG GGAGCTGCCG CCCTACGTCG ACTTCGGCGA GAGTTTCTAT
TCGCTGACCG CGGACTACGA CGTGACCCTC GATCACCCGG CGACCCTGCA GGTCCCCTCG
ACCGGAACCG TCGCGGGGGA GACCACTGCG GCGAACAGGG TCATCACCCA CATAACGGCG
CCCAAGGTAC GTGACTTCTC CTGGTCGGCC GGCGCGTTCC ACCACGACAG CGTGGTCAGC
GGCACCGGCG TGGAGATCGA CGCCTACTGG CCGAACTCCG AGAGCGATTC CAACTGCCGC
TCCCTGATGC ACTACGCGGC GCAGGCCATG GACGCCTATG CGGCACGCTT CGGCGCGTAT
CCCTACCCGC GCTTCACGAT CGTGTTCGAC GAGTTCGGGG CGGCCTTCGA CGGCATGGAG
TACCCGAACT ACGCCCTGGC CTCCGCCTAC CAGGGAGCGG TCGCGCACGA GGTCGCGCAC
CAGTGGTGGT TCGCACTGGT CGGCGACGAC CAGTACCGGC ATCCCTGGCT CGACGAGGCG
TTCGCGGAGT ACAGCGCCGA GGAGTTCCAA GGCTCGACGA CCCCGGCGCA CAACTGCGAC
TGGATCGCCT CCGACGAGCG CATGGACGAC TCCATGGACA CCTATGAGAA AGCCGGGGAC
AACCTGTACC ACGACGCCAT CTACCACGAG GGCACGTGCA TGCTGTTCGA TCTGGAGAAC
ACGATCGGAC GCGCCGCCAT GGACCAGATG CTGCGCGGGC TGTCGACCGA GTTCGAGTAC
GGAGTCGTGC AGCCCTCCGA CGTGCGCGCC ATGGCGCAGA AGGTATCGGG GCGCGACCTG
TCGGCGTTCT GGGCGAAGTG GCGCAACACC GGCGACTGA
 
Protein sequence
MTAGVSGLRR AGLWVPLGGA AMSVVAAAFI AAPLGPHPLP LPSQIEGASI DSSTAVGDYA 
ATGKSVVAAA HGDPTAPADA RYTVSLKSDD TGHSWSGTEQ ISFANSGTVP ITEFWIRLWG
NGDASCGATQ PERISDLSGG SVAETQQNCT AFRIVLDRAL APGASAQVGF NLAIDVPTRR
DRFGVNGVDT YVGNALAVLA VKDEHGWELP PYVDFGESFY SLTADYDVTL DHPATLQVPS
TGTVAGETTA ANRVITHITA PKVRDFSWSA GAFHHDSVVS GTGVEIDAYW PNSESDSNCR
SLMHYAAQAM DAYAARFGAY PYPRFTIVFD EFGAAFDGME YPNYALASAY QGAVAHEVAH
QWWFALVGDD QYRHPWLDEA FAEYSAEEFQ GSTTPAHNCD WIASDERMDD SMDTYEKAGD
NLYHDAIYHE GTCMLFDLEN TIGRAAMDQM LRGLSTEFEY GVVQPSDVRA MAQKVSGRDL
SAFWAKWRNT GD