| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_3093 |
|---|
| Symbol | |
|---|
| ID | 8334445 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | + |
|---|
| Start bp | 3398594 |
|---|
| End bp | 3399679 |
|---|
| Gene Length | 1086 bp |
|---|
| Protein Length | 361 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 644956240 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_003113843 |
|---|
| Protein GI | 256392279 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG3839] ABC-type sugar transport systems, ATPase components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.3063 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGCGACAG TCGATTTCAT TCGCGCAAGT TGCACGTACC CGGAGGGGAA ACGCAAAGCC
GTTGACAATC TGACGCTGTC TGTGGGGGAC GGCGAGTTCC TGGTGCTGCT CGGGCCCTCG
GGCTGCGGCA AGACCACGGC GCTGCGCATG CTCGCCGGCC TGGAGGAGGT CCAGACCGGC
CAGGTCCTGG TCGACGGGCA GGACCTGGAA GGCATGCCCC CCGGCGATCG CGACCTGGCG
ATGGTGTTCC AGAGCTACGC GCTCTTCCCG CACATGTCGG TCGCCCGAAA CCTCGGATTC
CGCATGGAGC TGGCCGGCGC CCCGCCTTCG GCCGTCTCCC GCCGCGTCCG CCGCATCGCC
GCGGAGCTGA ACCTGACCGA CCGGCTCGAC CGGCTGCCCA AGACCCTGTC CGGCGGCGAG
CAGCAGCGCG TGGCGATCGG CCGCGCCATG GTGCGCGAAC CGCGCGTGTT CCTGATGGAC
GAACCCCTGG GCGCGCTGGA CGCCAAGCTG CGCACCACGG CGCGCGCGAA GATCGCGGAG
ATGCAGCGCA AGAGCGGCAT CACGACCCTG TACGTGACCC ACGACCAGGT CGAGGCCATG
GCGATGGGCG ACCGCATCGC GATCATGAAC CGCGGCATGC TCCAGCAGGT CGACACCCCG
CGGCAGCTGT ACGACCACCC GGTGAACGAG TTCGTCGCCG GCTTCGTCGG ATCCCCGGCG
ATGAACCTGG TCCCCGGCAC GTACAAGCAC GGCTGGGCCC TGATCGGCGA GTCGGACGTC
TTCGAGGTCC CGGTGGAGGT GTCCCAGCCG CTGACGTCGC CGTCGGTCCT GGTCGGCTTC
CGCCCGGAAC ACGCGAAGTT CGCCGCGCCG GGCAGCGGGA TCTACGCCAT CGTCGGACTG
GTCGAGCGCC TGGGGCACAC GGCTTACGCG CACTGCGAGA TGGGAATCGG CCGCGGCCGG
CGGACGGTGA TCGTCCGCTG CGACGAGTAC GACGCACCGC GCCCCGGCGC TCATGTCGGC
GTGGTGCCGG ACCCCCGAGA GATTCACCTT TTCGACGGGG AGAGCGGGCT GCGGGTGGGG
CGGTAG
|
|---|
| Protein sequence | MATVDFIRAS CTYPEGKRKA VDNLTLSVGD GEFLVLLGPS GCGKTTALRM LAGLEEVQTG
QVLVDGQDLE GMPPGDRDLA MVFQSYALFP HMSVARNLGF RMELAGAPPS AVSRRVRRIA
AELNLTDRLD RLPKTLSGGE QQRVAIGRAM VREPRVFLMD EPLGALDAKL RTTARAKIAE
MQRKSGITTL YVTHDQVEAM AMGDRIAIMN RGMLQQVDTP RQLYDHPVNE FVAGFVGSPA
MNLVPGTYKH GWALIGESDV FEVPVEVSQP LTSPSVLVGF RPEHAKFAAP GSGIYAIVGL
VERLGHTAYA HCEMGIGRGR RTVIVRCDEY DAPRPGAHVG VVPDPREIHL FDGESGLRVG
R
|
|---|
| |