| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_3088 |
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| Symbol | |
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| ID | 8334440 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 3392093 |
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| End bp | 3393223 |
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| Gene Length | 1131 bp |
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| Protein Length | 376 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644956235 |
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| Product | 2-nitropropane dioxygenase NPD |
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| Protein accession | YP_003113838 |
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| Protein GI | 256392274 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2070] Dioxygenases related to 2-nitropropane dioxygenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.151695 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.231095 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGAACCC CGCTCTCGGC ATCCCTGGGT CTGGAATTCC CCCTGTTCGC GTTCAGCCAC
TGCCGCGATG TCGTCGCGGC GGTCACCCGG GCCGGCGGCC TGGGCGTCCT GGGCGCCGTC
TACTTCACCC CCGACGAGCT GGAGACCGAG CTGCGCTGGC TGGACGCGCA CACCGACGGC
AAGCCGTACG GCGTCGACGT CGTCATGCCG GCCTCCGTCT CCACCTCGGT GAACGAGGTC
TCCGCCAAGG ACTCGGCGCG TACGAGCATG GAGGAGACGC TCAAGTCCTA CATCCCGGCC
AAGCACCGCG ACTTCGTGGA GGGCATCCTC GACAAGTACG AGGTGCCCGA ACTCCCCGCG
GACGGCGACC ACAGCCACCA GCTCCTGGGC TGGACCGACG CCACCGCGCG CCCGCAGGTC
GAGGTCGCCC TCGACCATCC GATCGCGCTG CTGGCCAGCG CCCTGGGCCC GCTGCCCGCC
GACATCGTGG AGCTGGCGCA CCGCAAGAAC GTGCGCACCG CGGGTCTGGC CTCCAGCGCG
CACCACGCCC GCAAGCAGGT CGAATGCGGC GTCGACATCA TCGTCGCGCA GGGCACCGAG
GCCGGCGGGC ACACCGGCGA GATCTCGACC ATGGTCCTGA TTCCCGAGGT GGTGGACGCG
GTCGGGGACA CTCCGGTCCT GGCCGCAGGC GGGATCGGCA ACGGACGCCA GGTGGCCGCG
GCGATGGCGC TCGGCGCACA GGGCGCGTGG ACCGGCTCGA TCTGGCTGAC CGTCGCCGAA
GCCGACACCG ACCCGCGCGT GGTCCCCAAG CTCCTCGCGG CGTCCTCGCG CGACACCGTC
CGCTCCCGTG CCCTGACCGG CAAGCCGGCG CGGCAGCTGC GCACCGACTG GATCGACGCC
TGGGAGAGCG AGGATTCCCC CGGCGCGCTG CCGATGCCGC TGCAGTACAT GCTGGTCTCC
GAGGCGCACC GGCGGATCTC GCGGGCCGGG CGGACCGAGC TGATGGGCAT GCCGGTCGGG
CAGATCGTGG GCTCGATGAC CGACGTCCGG CCGGTCCGGG AGGTGATCTA CCAGCTGGTC
GAGGAGTACG CGGCGGCCGT CGAGCGGCTG GGCGCGATCA CCGAGGCGTG A
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| Protein sequence | MRTPLSASLG LEFPLFAFSH CRDVVAAVTR AGGLGVLGAV YFTPDELETE LRWLDAHTDG
KPYGVDVVMP ASVSTSVNEV SAKDSARTSM EETLKSYIPA KHRDFVEGIL DKYEVPELPA
DGDHSHQLLG WTDATARPQV EVALDHPIAL LASALGPLPA DIVELAHRKN VRTAGLASSA
HHARKQVECG VDIIVAQGTE AGGHTGEIST MVLIPEVVDA VGDTPVLAAG GIGNGRQVAA
AMALGAQGAW TGSIWLTVAE ADTDPRVVPK LLAASSRDTV RSRALTGKPA RQLRTDWIDA
WESEDSPGAL PMPLQYMLVS EAHRRISRAG RTELMGMPVG QIVGSMTDVR PVREVIYQLV
EEYAAAVERL GAITEA
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