Gene Caci_3083 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_3083 
Symbol 
ID8334435 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp3387103 
End bp3387600 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content71% 
IMG OID644956230 
Productcysteine dioxygenase type I 
Protein accessionYP_003113833 
Protein GI256392269 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.569754 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.0821213 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCTCGG CCTTGCAGAC GCCTGATCTC GACGTCGCCG AAGCCTTTCT GCACGATCTC 
GTCATCCCCG ACCGTCCTTT GTGGACCCCG ACGCAGCTCA GGGATCTGAC CCGGGCGCTG
GCCGACGTCC ATGGCGACCG GCTGCGTCCG CTGGTGCGGC ACACCGAGCC GCAGCGGTGG
TGGACGCGGC TCGCCCTGAC GCGCGGCGTC GAGGTGTGGC TGCTGAGCTG GCTGCCGGGG
CAGGGGACGA AGCCGCACGA CCACGGCGGC GCCGCCGGGT CCTTCGCCGT GCTGAGCGGC
GAGGTGCAGG AGGAGCACCG GTATCCCGGG GGTCCGATCG GGGTGCGCCG GCTTCAGGTC
GGCGACGCTT TGGGATTCGG CGGGGATCGC GCGCATATCG TGCGGCAAAC GGGTATCCGG
CCCGCCGCGA CCGTGCACGC CTATTCGCCC CCGCTGCTTC CCACCCGGGA GTACGAGAGC
CTGGAGGACC TGGTTTGA
 
Protein sequence
MSSALQTPDL DVAEAFLHDL VIPDRPLWTP TQLRDLTRAL ADVHGDRLRP LVRHTEPQRW 
WTRLALTRGV EVWLLSWLPG QGTKPHDHGG AAGSFAVLSG EVQEEHRYPG GPIGVRRLQV
GDALGFGGDR AHIVRQTGIR PAATVHAYSP PLLPTREYES LEDLV