| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_3065 |
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| Symbol | |
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| ID | 8334417 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 3371286 |
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| End bp | 3373022 |
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| Gene Length | 1737 bp |
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| Protein Length | 578 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644956212 |
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| Product | copper resistance protein CopC |
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| Protein accession | YP_003113815 |
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| Protein GI | 256392251 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2372] Uncharacterized protein, homolog of Cu resistance protein CopC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000363543 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.00940115 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGACGACCG CTCGGTCCGC GACGGCGGCG CGCGCCGCCG TCCGGGCCGG CGGCATACGC
CGGCGCCTCG TCGCGGTCCT GACCGCGGTG CTGTGTATAT GGGGCTTGGC CGCTGCGCCC
TCGGCCTCGG CGCACGCCAC CGTCGTGACG ACCGACCCGG CCGACGGCGC GCTGCTATCA
ACCGCCCCGG CGCGCGTCAC GGTCACCTAC AACGAGGCCG TGTCGCTGCA ACTCGGCGCG
CTGCGGGTCT TCGCCCCCGA CGGCTCGCAG GTCGAGATCG GCACGGCCGA CCACCTCAAC
GGCAAGCCGG AGACGGCGAC CGTGCCGCTG AAGGCCGGGC TGAAGAACGG TACGTATGTC
GTCTCCTGGC GCGTCATCTC AGCGGACTCC CACCCGGTGC GCGGCGCCTG GACGTTCTCC
ATCGGCACCA CCTCCGCGGC GAACTCCGGC GGAGCGGCGG CCGCGCCGAG CGGCTCGCGC
ACGGTCGGCG TGCTGTTCGG CATCGCGCGC TGGCTCGCCT ACCTCGGCTT CGCCGCCCTG
GCCGGCGGCA CGCTGCTGCT CATCGCCTTC GCACCGAAGC TGGCGCACGA CCGGCGGCTG
CGGCTGCTGA TCGGCGGCGG CTGGTTCGCG CTGCTGCTCG GGACGGTCGC GGCACTGCTG
TTGCAGGGCC CTTATGGCGG CGGGTTCGGG ATCGGGCGCG CGACCGACGC CGACGTCCTG
CGCGCCACCC TGAACACCAA GCTCGGCAAG GCGCTGGCCT GGCGTCTCAT CCTGCTCGGC
GCGGCGGGGG TCCTGGTGTC GTGGACGGCG ACGCGGCTCG CCGAAGCCTC GGTGCGTGCA
CGGCAGGTCG CCGGGGGCGT CGGGGCGGCG CTGGCCGTGG CGCTGGCAGT GACGTGGTCG
GTCGCCGACC ACTCCGGCAC CGGATCGCAG GTCGCGCTGG CGCTGCCCGC CGACGTGCTG
CACCTGCTGG CGATGGCGAC GTGGGTCGGC GGACTGGCGG CACTGGCGGT TTCGGTCCTG
AGCCCGCAGA CAGCGGCACT CGACGCCGAC TCACGCCTAA AGCTGGTACG CCGCTTCTCC
ACGACCGCCT TCACAGCCGT CTGCGTCCTC GCCACCACCG GCGTCTACCA GGGCTGGCGC
CAGGTCCGCC ACTGGCACGC CCTGTTCGGC ACGGACTACG GCCGCATGCT GATCATCAAG
TCGAGCATCT TCCTGACCCT GCTCACCCTG GGCTACTTCG CCCGCCGCAT CCTCGCAGCG
GACTCTCCCG ACCTGAAGCG GCTGCGACGC TCGGTCGCCG CCGAATTCGG CCTTGCGCTC
GTGGTCCTGG CGGTCACGGC ACTGCTCGTG GAGTCCCAGC CGGCGTCCGC AGCAGCGCCG
AAGTCCGGAC CCGTGACGGT GACAATGCCC TTCGACACCG GCGCACCGAA CGGCACCGGA
ACCGGCACGG TGACCGTCAC CCTCGACCCA GCCCGCGTCG GCCCGGACCA GCTACAGATC
TCCATCCTGG ACAAGACCGG CAAGCAAGAG TCGGTCCCCG AAGTCGACGC CTCACTGGCA
CTGCCGGCCC AACAACTCGG ACCCATCGCG ATGAAACTCC AACCCACCGC CCCCGGCCAC
TACACCGCGA GCAACGTCCT GATCCCGATG CCCGGCGCCT GGCAGGTCCT GGTCACAGTC
CGCACCACCG ACATCGACCA GTCGACGGTC ATCCTCAACG TCACCATCGG CAAGTAG
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| Protein sequence | MTTARSATAA RAAVRAGGIR RRLVAVLTAV LCIWGLAAAP SASAHATVVT TDPADGALLS
TAPARVTVTY NEAVSLQLGA LRVFAPDGSQ VEIGTADHLN GKPETATVPL KAGLKNGTYV
VSWRVISADS HPVRGAWTFS IGTTSAANSG GAAAAPSGSR TVGVLFGIAR WLAYLGFAAL
AGGTLLLIAF APKLAHDRRL RLLIGGGWFA LLLGTVAALL LQGPYGGGFG IGRATDADVL
RATLNTKLGK ALAWRLILLG AAGVLVSWTA TRLAEASVRA RQVAGGVGAA LAVALAVTWS
VADHSGTGSQ VALALPADVL HLLAMATWVG GLAALAVSVL SPQTAALDAD SRLKLVRRFS
TTAFTAVCVL ATTGVYQGWR QVRHWHALFG TDYGRMLIIK SSIFLTLLTL GYFARRILAA
DSPDLKRLRR SVAAEFGLAL VVLAVTALLV ESQPASAAAP KSGPVTVTMP FDTGAPNGTG
TGTVTVTLDP ARVGPDQLQI SILDKTGKQE SVPEVDASLA LPAQQLGPIA MKLQPTAPGH
YTASNVLIPM PGAWQVLVTV RTTDIDQSTV ILNVTIGK
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