Gene Caci_3062 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_3062 
Symbol 
ID8334414 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp3368350 
End bp3368865 
Gene Length516 bp 
Protein Length171 aa 
Translation table11 
GC content71% 
IMG OID644956209 
ProductGlyoxalase/bleomycin resistance protein/dioxygenase 
Protein accessionYP_003113812 
Protein GI256392248 
COG category[R] General function prediction only 
COG ID[COG2514] Predicted ring-cleavage extradiol dioxygenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0224113 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.0364236 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGTGA CCCGCCTCAA CCACGCCGTG CTCTTCGTCC GGGAGGTGGA GCGCAGTGTC 
GTGTTCTACC GCGACCTGTT GGGCTTCGAG GTGCTGACGC AGGCTCCGAA CGCCGCCTTC
CTGCGCGCAC CGGGCTCCAC CAACGACCAC GACCTCGGCC TGTTCTCGGT CGGCCTGCAC
GCCGGGTCCT CCGAGGCCGG ACGCTCCCGC GTCGGGCTGT ACCACCTGGC GTGGGAGGTG
GACACCCTGG CGGAGCTGGC GCGCTTCGAG GAGGCGCTGA CGGCGCACGG CGCACTGGTC
GGCGCCAGCG ACCACGGCAC CACCAAGGCC CTGTACGCAC ACGACCCCGA CGGCCTGGAG
TTCGAGATGT CCTGGCTGGT CCCGGCCGAC CGCGTGGCCG ACGCGCAGCT GCCGGAAGGC
TCGGTCACCC TGCCGCTGGA CCTGAAGAAG GAGATCGAGC GCTACGGCGC CGAGACGCGC
GGCGGGGTCG GGATCTCGCA CATCGCCGCA CCCTGA
 
Protein sequence
MPVTRLNHAV LFVREVERSV VFYRDLLGFE VLTQAPNAAF LRAPGSTNDH DLGLFSVGLH 
AGSSEAGRSR VGLYHLAWEV DTLAELARFE EALTAHGALV GASDHGTTKA LYAHDPDGLE
FEMSWLVPAD RVADAQLPEG SVTLPLDLKK EIERYGAETR GGVGISHIAA P