Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_3061 |
Symbol | |
ID | 8334413 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 3367362 |
End bp | 3368090 |
Gene Length | 729 bp |
Protein Length | 242 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 644956208 |
Product | cytidylate kinase |
Protein accession | YP_003113811 |
Protein GI | 256392247 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0283] Cytidylate kinase |
TIGRFAM ID | [TIGR00017] cytidylate kinase |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.110176 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.04389 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGCTGC CCAGCCAGCA GGCTCTGTCC GGGATGGTCG TCGCCATCGA CGGTCCCTCC GGGTCGGGCA AGTCGAGCGT GTCGCGCGGG GTCGCGGCCC GGCTGGGGCT GCGCTACCTG GACACCGGCG CGCAGTACCG GGCGATGACG TACTGGATGC TGCAGAACAA GGTGGACGTC GGCGATCCCG CCGCGGTGGC GGCCGACGCC GGGACCCCGG TGATCGTCTC CGGGACCGAT CCGGCGGCGC CGGCGATCGG CGTGGACGGC GAGGACGTGG CGGTCCAGAT CCGGGAGGCC GACGTCACCG GCGCGGTGAG CGCGGTGGCC GCGGTGCCCG AGGTGCGGGC CCGGCTGATC GCGCTGCAGC GGGAGATCAT CGGCGGCGGC GGGATCGTGG TCGAGGGCCG GGACATCGCC TCGGTGGTGG CGCCCGCCGC CGGCGCGAAG ATCTTCCTGA CCGCCTCGCA GGAGGCGCGC GCCGCCCGGC GCAACACCGA GAACGGCGGC GGAGCCGGCG GCGTGGCGGC CACCCGCGAG GCGCTGACCC GCCGCGACAG CGTCGACAGC CGGACCAACG CGCTGGCCGC GGCTCCCGGG GCGGTGGTGG TCGACGCCAC CGAACTGACA CTGGAGCAGG TGATCGAACA GGTCGCCGGC ATCGTCATCC ACACGGCGGA GGGCACCGCG CCGGACGCCG CCTCCCAGGG GGTGGGACTC ACCAGATGA
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Protein sequence | MSLPSQQALS GMVVAIDGPS GSGKSSVSRG VAARLGLRYL DTGAQYRAMT YWMLQNKVDV GDPAAVAADA GTPVIVSGTD PAAPAIGVDG EDVAVQIREA DVTGAVSAVA AVPEVRARLI ALQREIIGGG GIVVEGRDIA SVVAPAAGAK IFLTASQEAR AARRNTENGG GAGGVAATRE ALTRRDSVDS RTNALAAAPG AVVVDATELT LEQVIEQVAG IVIHTAEGTA PDAASQGVGL TR
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