Gene Caci_3061 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_3061 
Symbol 
ID8334413 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp3367362 
End bp3368090 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content75% 
IMG OID644956208 
Productcytidylate kinase 
Protein accessionYP_003113811 
Protein GI256392247 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0283] Cytidylate kinase 
TIGRFAM ID[TIGR00017] cytidylate kinase 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.110176 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.04389 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCTGC CCAGCCAGCA GGCTCTGTCC GGGATGGTCG TCGCCATCGA CGGTCCCTCC 
GGGTCGGGCA AGTCGAGCGT GTCGCGCGGG GTCGCGGCCC GGCTGGGGCT GCGCTACCTG
GACACCGGCG CGCAGTACCG GGCGATGACG TACTGGATGC TGCAGAACAA GGTGGACGTC
GGCGATCCCG CCGCGGTGGC GGCCGACGCC GGGACCCCGG TGATCGTCTC CGGGACCGAT
CCGGCGGCGC CGGCGATCGG CGTGGACGGC GAGGACGTGG CGGTCCAGAT CCGGGAGGCC
GACGTCACCG GCGCGGTGAG CGCGGTGGCC GCGGTGCCCG AGGTGCGGGC CCGGCTGATC
GCGCTGCAGC GGGAGATCAT CGGCGGCGGC GGGATCGTGG TCGAGGGCCG GGACATCGCC
TCGGTGGTGG CGCCCGCCGC CGGCGCGAAG ATCTTCCTGA CCGCCTCGCA GGAGGCGCGC
GCCGCCCGGC GCAACACCGA GAACGGCGGC GGAGCCGGCG GCGTGGCGGC CACCCGCGAG
GCGCTGACCC GCCGCGACAG CGTCGACAGC CGGACCAACG CGCTGGCCGC GGCTCCCGGG
GCGGTGGTGG TCGACGCCAC CGAACTGACA CTGGAGCAGG TGATCGAACA GGTCGCCGGC
ATCGTCATCC ACACGGCGGA GGGCACCGCG CCGGACGCCG CCTCCCAGGG GGTGGGACTC
ACCAGATGA
 
Protein sequence
MSLPSQQALS GMVVAIDGPS GSGKSSVSRG VAARLGLRYL DTGAQYRAMT YWMLQNKVDV 
GDPAAVAADA GTPVIVSGTD PAAPAIGVDG EDVAVQIREA DVTGAVSAVA AVPEVRARLI
ALQREIIGGG GIVVEGRDIA SVVAPAAGAK IFLTASQEAR AARRNTENGG GAGGVAATRE
ALTRRDSVDS RTNALAAAPG AVVVDATELT LEQVIEQVAG IVIHTAEGTA PDAASQGVGL
TR