Gene Caci_3043 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_3043 
Symbol 
ID8334394 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp3355675 
End bp3356496 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content68% 
IMG OID644956189 
ProductD12 class N6 adenine-specific DNA methyltransferase 
Protein accessionYP_003113793 
Protein GI256392229 
COG category[L] Replication, recombination and repair 
COG ID[COG0338] Site-specific DNA methylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0103783 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.290519 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCCCGT TCAGCTATTT CGGTGGGAAA TCAACTCTCG CCCCTGTCAT CGCCGGCCTG 
CTGCCCGCCC ACGGACACTA CGTCGAGCCG TTCGCCGGAT CCCTGGCGGT TCTGCTAGCC
AAGGCGCCGT CCCGAATGGA AACCGTTAAC GATCTCGACG GCGGGCTCAT GGCCTTCTGG
CGGGTCCTGC GCGACCGCCC GGCCGATCTG GAGCGCGTCT GTGCTCTGAC ACCGCACTCG
CGCGCCGAGT ACCTCGATGC CTACCGCACC GACGATGCTC CCGACGATCT GGAGCGTGCA
CGCCGCATAT GGGTTCAGCT TGCTCAGGGT CGCGCCGGGA CTCGTCGTCC GACCGGTTGG
CGCCACTACC AGGAGTCGGC CGGGTACAGC ACCTCGATGG CCGGCTACCT CGCCGGTTAC
GTCGGCCGCA TGGCCCCTAC CGCCGCCCGA CTGGCGCAGG TGTCGTTGGA GTGCCGCCCG
GCGCTGGAGG TCATCGAGGC TTACGGGCGC CACGCCGACG TGCTGCTGTA CGTCGACCCG
CCGTACCTGG CCGGCACGCG CAACGGCACC AACTACTTGC ACGAGATGCC GCACAAGGAC
GACCACCGCA AGCTCGCTGC GGCGCTGAAC GCCTGCCAGG CGACCGTGGT GCTGTCCGGC
TACGGCTCGC CACTGTACGA CGCGCTGTAC GACGGCTGGG ACCGGCACGA GATCAGCGCC
ATGACGACGC AGGGCGGCAC GCACGGGCGC CGTACTGAGG TGTTGTGGTC GAACCGGCCG
CTGGAGGTTC AGCAGGGACT GTTCGAGGTG GCCGCCTCAT GA
 
Protein sequence
MPPFSYFGGK STLAPVIAGL LPAHGHYVEP FAGSLAVLLA KAPSRMETVN DLDGGLMAFW 
RVLRDRPADL ERVCALTPHS RAEYLDAYRT DDAPDDLERA RRIWVQLAQG RAGTRRPTGW
RHYQESAGYS TSMAGYLAGY VGRMAPTAAR LAQVSLECRP ALEVIEAYGR HADVLLYVDP
PYLAGTRNGT NYLHEMPHKD DHRKLAAALN ACQATVVLSG YGSPLYDALY DGWDRHEISA
MTTQGGTHGR RTEVLWSNRP LEVQQGLFEV AAS