Gene Caci_3041 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_3041 
Symbol 
ID8334392 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp3354330 
End bp3355265 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content68% 
IMG OID644956187 
ProductGp37Gp68 family protein 
Protein accessionYP_003113791 
Protein GI256392227 
COG category[S] Function unknown 
COG ID[COG4422] Bacteriophage protein gp37 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00607224 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.308879 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCAA AGACGAAGAT CCAGTGGACC ATGTCCGACG ATGGGACCCC GGGCGCGACC 
TGGAATCCCA TCACCGGCTG CACCAAGGTT TCCGACGGCT GCCTGAAGTG CTACATCACC
GGCACACCGC CGTTCCGCAT CGCGCACCGC AAGTTCGACA AGCCCGGCAT CGGCGGCACC
ACCGGCATCC TGTTCCACCC CGAGCGGCTG TCCGCGCCGC TGCACTGGCG CAAGCCCCGC
CGCGTGTTCG TGAACAGCCT CTCGGACCTG TTCCACGAGG ACGTCCCGAC CGAGTACATC
GCGCGAGTGT TCGCCGTCAT GGCCAAGACG CCACAGCACG TCTACCAGGT GCTGAGCAAG
CGGCACGGGC GGATGCGGTC GTTGCTTCGC GACGGCGGGC AGGCACTGCT GGAGGCGACC
AACGACGAGG ACACGGCGTC CGCACTGTAC GACGCGCCGT GGCCCCTGCC GAACGTCTGG
CTGGGCGTGA GCACTGAGGA TCAGCACACG GCGAACCTGC GCATCCCGGC GCTCTTGGAG
ACCCCGGCCG CGATCCGCTT CATCTCGGCG GAGCCTCTGC TGGGACCAAT CGATCTGCAG
CACCTGGAAG CGCGCGGCGT CATCATGGAC GCGCTCGGCG GGGATGTCTC CTTCCCGGGG
ACGGGCGAGA TCTTCACGGG AACGCCGTCG ATCCTGGATT GGATCATTGC CGGCGGAGAG
TCCGGCCCCG GCGCTCGACC GATGGATCCG GCGTGGGTTG CCTCGATCGT CGAGCAGTGC
CGTCCCGGCG TGAACCACGC ATTCGTTAAG CAGCTCGGCT CCGTGTGGGC GAAGGCGAAT
GGCGCTGCAG ACCGCAAGGG CGGCGACCTG GAGGAGTGGC CGGCCGAGCT CCGCGTGCGG
CAGTTCCCGC AGGCGGAGAT GGCGGTGGCT TCATGA
 
Protein sequence
MSAKTKIQWT MSDDGTPGAT WNPITGCTKV SDGCLKCYIT GTPPFRIAHR KFDKPGIGGT 
TGILFHPERL SAPLHWRKPR RVFVNSLSDL FHEDVPTEYI ARVFAVMAKT PQHVYQVLSK
RHGRMRSLLR DGGQALLEAT NDEDTASALY DAPWPLPNVW LGVSTEDQHT ANLRIPALLE
TPAAIRFISA EPLLGPIDLQ HLEARGVIMD ALGGDVSFPG TGEIFTGTPS ILDWIIAGGE
SGPGARPMDP AWVASIVEQC RPGVNHAFVK QLGSVWAKAN GAADRKGGDL EEWPAELRVR
QFPQAEMAVA S