Gene Caci_3032 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_3032 
Symbol 
ID8334383 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp3348697 
End bp3349710 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content67% 
IMG OID644956178 
Productprotein of unknown function DUF1643 
Protein accessionYP_003113782 
Protein GI256392218 
COG category[S] Function unknown 
COG ID[COG4333] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0234736 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.151204 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTAACA CCCCATTCGT ATCCGAGCGC CATGACCACA CTGCAGGCGC CGACAAGGCC 
GCGTTCAGCC CTGACGGCAG CTACCGGTAC TTCCTGTCCC GCCGGTGGGC TCCGGGGCCA
AGCATCTGCT GGGTCATGCT CAATCCGAGC ACGGCAGACG CGTTTCGAGC CGATAACACC
ATCAAGAGGT GTATTCACTT CTCGCGACGC GCCGGTTACG GCGCCCTGGC TGTGGTCAAC
CTCTACAGCC TGCGCTCCAC CAATCCCGAC GCGCTGTGGA CCCACCCCGA CCCGATCGGA
CCCCTCGGCG ACCAGTTCCT GCGCGAACAG GCCGGCGGAC GCACCTCCGT CATCACCGCC
TGGGGAACCC TCGGCGTAGG CACGCCGGCC GCGCCCAACA ACCGCGGACC GCAAGTCGCC
GACATGCTCG CCGACGCCGG CGTGTCGCTG CTATGCCTCG GCACCACCGC CAACGGGCAG
CCGAAGCATC CGCTGTACAT CCACGGAGAT ACGCCGCTCG AGCCGTACCG GGTGGGGGGT
GGGGTGCGAT GCCTGAGCTC CCGCGCCGTA TCCAGCTGTC CCGGCAGAAG GGCTGGCGCA
AGCCCGAAGG CGCCGTCGTC GTATCCCGAC CGGGCCCCTG GGGCAATCCA TTCAGCGTCA
CCAAGGGCAG CGTCGGCTGG TACATCTACG AGCCCCTTAG CCGACAGCAG TTCGACGAGC
TGGGCAGCCT TACCACCCGG GCTGAGGCAC AGGAACTCGC CGTCCACCTG TACGGCGCGT
GGCTCAAGGG CGACCTGTTC GCTGTCGAGC TCGAGCTACG GCGGCGCCGG ATTCTCGAAC
ACCTGCCCGC GCTGGCAGGC AAGGACCTCT GCTGCTGGTG CGCTCCGGGA ACTGCCTGCC
ACGTCGATGT CCTGCTGCCT CTGGTGGCCG AAAGGTGCGG CACGGGCCCT GCCGCTGATC
CGCAAAGGAG CACCCAGACA TGACCATGAC AGCTCAAGCC GCTCACCCCG CTGA
 
Protein sequence
MPNTPFVSER HDHTAGADKA AFSPDGSYRY FLSRRWAPGP SICWVMLNPS TADAFRADNT 
IKRCIHFSRR AGYGALAVVN LYSLRSTNPD ALWTHPDPIG PLGDQFLREQ AGGRTSVITA
WGTLGVGTPA APNNRGPQVA DMLADAGVSL LCLGTTANGQ PKHPLYIHGD TPLEPYRVGG
GVRCLSSRAV SSCPGRRAGA SPKAPSSYPD RAPGAIHSAS PRAASAGTST SPLADSSSTS
WAALPPGLRH RNSPSTCTAR GSRATCSLSS SSYGGAGFSN TCPRWQARTS AAGALRELPA
TSMSCCLWWP KGAARALPLI RKGAPRHDHD SSSRSPR