| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_3031 |
|---|
| Symbol | |
|---|
| ID | 8334382 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | - |
|---|
| Start bp | 3347748 |
|---|
| End bp | 3348674 |
|---|
| Gene Length | 927 bp |
|---|
| Protein Length | 308 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 644956177 |
|---|
| Product | ParB domain protein nuclease |
|---|
| Protein accession | YP_003113781 |
|---|
| Protein GI | 256392217 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1475] Predicted transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.0813346 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.0592019 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCATCG CCAACATCAC CATCGGCACC CGCTGCCGCA AAGACCTCGG AAAGCTGCGA
GATCTCCAGC GCTCCATCCG CGTGGCGGGA CTGCTGACGC CAATACCCGT CACCGCGGAT
GGACAGCTCA TCGCCGGCGA GCGCAGACTG CGCGCCTGCC GGAACCTCGG CTGGGAGCGG
GTACCGGTCA TCGTCGCAGC TAACGGCGCC CACGCCATCG ACCTCATCCG CGCCGAACAC
AACAACGGCC CGCACTCGCT GCCGATGTCC GCGACCGAGC TGACGCGCCT CGGTATGCGG
ATCGAAGAGC ACGGCCACGA ACTGGCGGTG GCCAACCGCG CCCACGGACA CAGCACCCTC
CCCGACGACA TCCGCGTCAA CCTGCGCGCA CTGGCCTCGG AGATCATCCA GATGCCGGAG
CACCACTACA GCAGAGTCAA GACCCTTGTT CTGGCAGCAG CTGGCGTCCA ATCAACACCG
GGCGGCTACG ACACCAGCAC GATCGCGCCG GATGCACGCA ACGCGGCACG CGAAGCGCTG
GAGCTGGTCG ATCGGGTCTA CGCCGGCGAG GAGATCCGAG TCCCCGGGCT GCGGGTACGC
CTGTCCACCG CCCGCATCTA CAAGAACTGG GTCGGCACCT ACCGGCACAT CCAGGAGCCC
CTGGACAACG TCGCCAAGGG TGACAAGGCG GCGCTTCAGG AGCCCCTGGT GAAGGTGCGC
ACCATGCGGA TCGACCAGCG TGAAGCGCTC GCGAAGGGAC TGTCCGCCCT CACCGGCTTG
TGCCACGGCC TCGCGTCGAT TAACAGCATC GACCCGGCCA TGACACGCGA AGAGGCCGCG
TCCTTCGAGC GCGACCTCTC CAACGCCTCC CGCGTTCTGA GAGGCCTCCA CAACAAGATC
AAGGAGTACG CCAATGGTAA CGCCTGA
|
|---|
| Protein sequence | MPIANITIGT RCRKDLGKLR DLQRSIRVAG LLTPIPVTAD GQLIAGERRL RACRNLGWER
VPVIVAANGA HAIDLIRAEH NNGPHSLPMS ATELTRLGMR IEEHGHELAV ANRAHGHSTL
PDDIRVNLRA LASEIIQMPE HHYSRVKTLV LAAAGVQSTP GGYDTSTIAP DARNAAREAL
ELVDRVYAGE EIRVPGLRVR LSTARIYKNW VGTYRHIQEP LDNVAKGDKA ALQEPLVKVR
TMRIDQREAL AKGLSALTGL CHGLASINSI DPAMTREEAA SFERDLSNAS RVLRGLHNKI
KEYANGNA
|
|---|
| |