Gene Caci_3014 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_3014 
Symbol 
ID8334365 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp3338039 
End bp3338452 
Gene Length414 bp 
Protein Length137 aa 
Translation table11 
GC content68% 
IMG OID644956160 
Producttranscription factor WhiB 
Protein accessionYP_003113764 
Protein GI256392200 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.371665 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.0294243 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCCGC TCCTGCGCAC CGACGGACCC ATCCACGGGC GAGTCCCGCG GACCGACACC 
ACAATCCAGT CCAGCACCAC CCGCTACCAG GCACCCGCCG AGCCGGAGTC GGAAGACAAC
TGGCGCCTGC GCGGCGTCTG CGCCAACTCC GGCGACATGG ATCGCTGGTT TCCCATGGGC
AACACCGGCC CGTGGCTACG GCAGATCGAA GAGGCGAAGA AGGCCTGCCT CACCTGCCCG
GTTCTGGAGA AGTGCGCCGA GCTGCTGGCG CACATGGAAC GCGAGCTGGG CGTCAACAGC
GTGTCCGGGA TCTGGGCCGG CACCGCGGAG GACGACCGGA TGAGCGAGAA GCGCAAGCAG
CAGCGCGCAG CGGCAAAGGT CCGCTACGAC GAGAAGCGGA AGGCTGCGGC GTGA
 
Protein sequence
MTPLLRTDGP IHGRVPRTDT TIQSSTTRYQ APAEPESEDN WRLRGVCANS GDMDRWFPMG 
NTGPWLRQIE EAKKACLTCP VLEKCAELLA HMERELGVNS VSGIWAGTAE DDRMSEKRKQ
QRAAAKVRYD EKRKAAA