Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_2972 |
Symbol | |
ID | 8334322 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 3321636 |
End bp | 3322544 |
Gene Length | 909 bp |
Protein Length | 302 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644956117 |
Product | putative phage polynucleotide kinase |
Protein accession | YP_003113722 |
Protein GI | 256392158 |
COG category | [R] General function prediction only |
COG ID | [COG4639] Predicted kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.200803 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.000387567 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGCCCACAA TCCACCTCAC CTGCGGGCTG CCGGCGAGCG GCAAGACCAG CCTCGCCCGT CAGCTTGTCG CCGAGTCTGC CGGCCGGATG CGCCGCGTGA ATCTCGACGA CCTGCGGTTG ATGCTCGACG CGAACGACGG CCGCATCCGG CTCGGCAGGG ACCACGAGGA GACGGTGCTC GCGGTCCAGG ACGCCGCGGT CCTCGCAGCG ATCGACGGCG GCTTCGACGT TGTGGTCGAC AACACGCACT TGGTCTCGCG GATCCCGAAC CGACTGAAGC GGGTTGTGGC CGGGCGCGCG GACTTCGCCG TGTACGACTT CACCGGCGTC GACGTTGAGG AGTGCATCGG CCGGGACAAG GTGCGGGAGC GTCCAGTTGG CGAGGACGTG ATCCGGAGCA TGGCCGAGCG GCTGAAGTCG ACGCGCGACG GCTGGTGGAA GCATCCGGAA CGGCTGAACG ACACGCCGGT GCCCGAACCC TACGTTCCCG ATCTGTCGCT GCCGCCTGCG GTCCTGTGTG ACATCGACGG GACGTTGGCC ATTCATGCCG GCCGCGGCGC CTACGACTTG GACCTGTGCG AGACCGACCT CCTGAACGAG GAAGTCGCTC GGGTCCTGGC GTTGTGCGAC CGTGCCGACG GCTACATCGT GCTGTTGTCG GGACGCCAGT CGGAGTTCCG GAAGCACACC GAGCGATGGC TGGCTGCGCA TCAGGTGCCG TATGACGAGC TGTGGATGCG GGCCGAGGGA GACCGGCGCA GCGACGACAT CGTCAAGGCG GAGTTGTTCG ATGCGCACGT GCGCGGCCTG TACAACGTGC GGTTCGTTCT GGACGATCGG GCGCGGGTGG TCGCGCTATG GAGGCGCCTG GGGCTGAAGT GCTGGCAGGT GGCATATGGC AATTTCTGA
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Protein sequence | MPTIHLTCGL PASGKTSLAR QLVAESAGRM RRVNLDDLRL MLDANDGRIR LGRDHEETVL AVQDAAVLAA IDGGFDVVVD NTHLVSRIPN RLKRVVAGRA DFAVYDFTGV DVEECIGRDK VRERPVGEDV IRSMAERLKS TRDGWWKHPE RLNDTPVPEP YVPDLSLPPA VLCDIDGTLA IHAGRGAYDL DLCETDLLNE EVARVLALCD RADGYIVLLS GRQSEFRKHT ERWLAAHQVP YDELWMRAEG DRRSDDIVKA ELFDAHVRGL YNVRFVLDDR ARVVALWRRL GLKCWQVAYG NF
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