Gene Caci_2972 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_2972 
Symbol 
ID8334322 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp3321636 
End bp3322544 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content67% 
IMG OID644956117 
Productputative phage polynucleotide kinase 
Protein accessionYP_003113722 
Protein GI256392158 
COG category[R] General function prediction only 
COG ID[COG4639] Predicted kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.200803 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.000387567 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGCCCACAA TCCACCTCAC CTGCGGGCTG CCGGCGAGCG GCAAGACCAG CCTCGCCCGT 
CAGCTTGTCG CCGAGTCTGC CGGCCGGATG CGCCGCGTGA ATCTCGACGA CCTGCGGTTG
ATGCTCGACG CGAACGACGG CCGCATCCGG CTCGGCAGGG ACCACGAGGA GACGGTGCTC
GCGGTCCAGG ACGCCGCGGT CCTCGCAGCG ATCGACGGCG GCTTCGACGT TGTGGTCGAC
AACACGCACT TGGTCTCGCG GATCCCGAAC CGACTGAAGC GGGTTGTGGC CGGGCGCGCG
GACTTCGCCG TGTACGACTT CACCGGCGTC GACGTTGAGG AGTGCATCGG CCGGGACAAG
GTGCGGGAGC GTCCAGTTGG CGAGGACGTG ATCCGGAGCA TGGCCGAGCG GCTGAAGTCG
ACGCGCGACG GCTGGTGGAA GCATCCGGAA CGGCTGAACG ACACGCCGGT GCCCGAACCC
TACGTTCCCG ATCTGTCGCT GCCGCCTGCG GTCCTGTGTG ACATCGACGG GACGTTGGCC
ATTCATGCCG GCCGCGGCGC CTACGACTTG GACCTGTGCG AGACCGACCT CCTGAACGAG
GAAGTCGCTC GGGTCCTGGC GTTGTGCGAC CGTGCCGACG GCTACATCGT GCTGTTGTCG
GGACGCCAGT CGGAGTTCCG GAAGCACACC GAGCGATGGC TGGCTGCGCA TCAGGTGCCG
TATGACGAGC TGTGGATGCG GGCCGAGGGA GACCGGCGCA GCGACGACAT CGTCAAGGCG
GAGTTGTTCG ATGCGCACGT GCGCGGCCTG TACAACGTGC GGTTCGTTCT GGACGATCGG
GCGCGGGTGG TCGCGCTATG GAGGCGCCTG GGGCTGAAGT GCTGGCAGGT GGCATATGGC
AATTTCTGA
 
Protein sequence
MPTIHLTCGL PASGKTSLAR QLVAESAGRM RRVNLDDLRL MLDANDGRIR LGRDHEETVL 
AVQDAAVLAA IDGGFDVVVD NTHLVSRIPN RLKRVVAGRA DFAVYDFTGV DVEECIGRDK
VRERPVGEDV IRSMAERLKS TRDGWWKHPE RLNDTPVPEP YVPDLSLPPA VLCDIDGTLA
IHAGRGAYDL DLCETDLLNE EVARVLALCD RADGYIVLLS GRQSEFRKHT ERWLAAHQVP
YDELWMRAEG DRRSDDIVKA ELFDAHVRGL YNVRFVLDDR ARVVALWRRL GLKCWQVAYG
NF