| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_2952 |
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| Symbol | |
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| ID | 8334302 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 3310444 |
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| End bp | 3311268 |
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| Gene Length | 825 bp |
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| Protein Length | 274 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644956097 |
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| Product | Ku protein |
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| Protein accession | YP_003113702 |
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| Protein GI | 256392138 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1273] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR02772] Ku protein, prokaryotic |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0023428 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.000343004 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCCGTCAG CCGTGTGGTC CGGGACGATC TCGTTCGGCT TGGTCAGCGT GCCCGTGCAG
CTGTACTCCG TTACCGACAG CGCCGGACCC GAACTGCACC AGTACCACGC CGAGGACGGC
GGCCGGATCC GGTACAAGCG GGTGTGCGAA GTCGACGGCC AAGAGCTGCA GCAGGACGAC
ATTGCCCGCG GCTACCCCGT CGGCGACGAC GAAGTGATCA TCACCGACCG GGACCTCGAC
GGCTTGCCCG AGGTCGCGAA GAAGATCGTC GCCATCGATG CGATCGTCCG CGAAGACCAG
ATCGACCCGA TCCAGTACCG GAAGGCCTAT TACGTTGCGC CGGAGAAGGC GGGACTCCGC
CCCTACGTAC TGCTGCGCAA TGCGCTTGCG AAGGCTGGAC GCGCCGCGGT TGTTACCTTT
GCGATGCGCG AGCGCGAGTC CCTAGCGCTG GTGCGGGCCC GCGACGACCT GCTGCTGCTC
GAGACGCTGT TCTGGCCCGA TGAAGTGCGT GAGATCCCCG TGGAGGCTCC GCCGGCCATC
GACGACAAGA CCGAGCTGAA AGCGGCCGTG GACCTGATCG AAGCCATGAC CTCTGACTTC
AAGCCCGAGC AGTACCACAA CCTGTACCGC GAGGCGCTCC AAGAGGTCAT CGAGGCCAAG
GAAGCCGGGC GCGAGGTGAC GCGCGTTGAG CAGCCGAAGG AAGACGCGGG TGCGAAGGTC
ACGGACCTGC TGTCGGCACT GCGGGCATCG GTGGAGCGGG CGAAGGAGAC GCGCGGCGAG
GGCGAGAAGC CGGCTGCGAA GAAGAGGGCG AAGAAGGCGG CCTGA
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| Protein sequence | MPSAVWSGTI SFGLVSVPVQ LYSVTDSAGP ELHQYHAEDG GRIRYKRVCE VDGQELQQDD
IARGYPVGDD EVIITDRDLD GLPEVAKKIV AIDAIVREDQ IDPIQYRKAY YVAPEKAGLR
PYVLLRNALA KAGRAAVVTF AMRERESLAL VRARDDLLLL ETLFWPDEVR EIPVEAPPAI
DDKTELKAAV DLIEAMTSDF KPEQYHNLYR EALQEVIEAK EAGREVTRVE QPKEDAGAKV
TDLLSALRAS VERAKETRGE GEKPAAKKRA KKAA
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