Gene Caci_2949 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_2949 
Symbol 
ID8334299 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp3309361 
End bp3309768 
Gene Length408 bp 
Protein Length135 aa 
Translation table11 
GC content66% 
IMG OID644956094 
Producthypothetical protein 
Protein accessionYP_003113699 
Protein GI256392135 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00263473 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.000305261 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGGCCCGT ACTCGGTAGA GCTACGGGCC AGTAGCGTCT TCTACCTGCG TCGCAGCGCC 
ACCGACGGCG AGATGGACGA GTCGCCCGAG TACGTAGACC AGCTGTTCAT CGAACACGCC
GAGGTCCCGA TGCTGCGGGC GGCGCTGGCG CAGGTCCAGA TGCACCCGCA CTACGCGGAG
GGTCGGTGGG AGACATCGCG GTTCTGGCTG ACTACCGAGC CGCCGCACGG CTACACGCCG
GAGCAGATCG AGGCTGCGAA CGAGCCGTGG GAGATCACCC GCAACAGGGC CGCGGTGGTG
ATTGCCGGGC CGTTGTGGAA CCCGCAGATG TGGCCCGACG GTCGGTTCCA GGTTGAGGTG
GAGTACGCGA AGTTAAACAA GCTGGTGGAA GCGCTCGACG TGGTCTGA
 
Protein sequence
MGPYSVELRA SSVFYLRRSA TDGEMDESPE YVDQLFIEHA EVPMLRAALA QVQMHPHYAE 
GRWETSRFWL TTEPPHGYTP EQIEAANEPW EITRNRAAVV IAGPLWNPQM WPDGRFQVEV
EYAKLNKLVE ALDVV