Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_2949 |
Symbol | |
ID | 8334299 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 3309361 |
End bp | 3309768 |
Gene Length | 408 bp |
Protein Length | 135 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644956094 |
Product | hypothetical protein |
Protein accession | YP_003113699 |
Protein GI | 256392135 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.00263473 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.000305261 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGGCCCGT ACTCGGTAGA GCTACGGGCC AGTAGCGTCT TCTACCTGCG TCGCAGCGCC ACCGACGGCG AGATGGACGA GTCGCCCGAG TACGTAGACC AGCTGTTCAT CGAACACGCC GAGGTCCCGA TGCTGCGGGC GGCGCTGGCG CAGGTCCAGA TGCACCCGCA CTACGCGGAG GGTCGGTGGG AGACATCGCG GTTCTGGCTG ACTACCGAGC CGCCGCACGG CTACACGCCG GAGCAGATCG AGGCTGCGAA CGAGCCGTGG GAGATCACCC GCAACAGGGC CGCGGTGGTG ATTGCCGGGC CGTTGTGGAA CCCGCAGATG TGGCCCGACG GTCGGTTCCA GGTTGAGGTG GAGTACGCGA AGTTAAACAA GCTGGTGGAA GCGCTCGACG TGGTCTGA
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Protein sequence | MGPYSVELRA SSVFYLRRSA TDGEMDESPE YVDQLFIEHA EVPMLRAALA QVQMHPHYAE GRWETSRFWL TTEPPHGYTP EQIEAANEPW EITRNRAAVV IAGPLWNPQM WPDGRFQVEV EYAKLNKLVE ALDVV
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