Gene Caci_2940 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_2940 
Symbol 
ID8334290 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp3304673 
End bp3305821 
Gene Length1149 bp 
Protein Length382 aa 
Translation table11 
GC content69% 
IMG OID644956085 
Productprotein-L-isoaspartate(D-aspartate)O- methyltransferase 
Protein accessionYP_003113690 
Protein GI256392126 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG2518] Protein-L-isoaspartate carboxylmethyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0132676 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.00277097 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGCCCGAGA CGCACACCGA CTTCGCGGGA CGGATCGCCG CCGAGGCCTA CTGGGAAGAC 
GACACCCTTG CCGACCCGGC TTGGCGCAAG GTGTTCGATG CCGTCCCGCG GTCTGCTTTC
GCACCCGACG ACTGGTTCGA ATGGAACGGC TACGGCTGGG ACGCCCGGCA TCGGGCAGAC
AACGAGCAGG ACTGGGACGA GGCGGTCCAC GCCGTGACCC AGCCGTTCAT CACGCAGGTC
GGCGACGACA ACATGCCCAC CTGCTCGCTG TCGGCGCCGA TGCTGGTCGC CGCCATGCTA
GGCACCCTCG ATCTTGACGA CGGGATGCGG GTGTTCGAGT CCGGCACCGG AACCGGCTGG
ACCGCGGCAC TGATGGCCGC CCGCGTCGGG CCCGCAGGCC TAGTGGTGAC GGTTGAGTAC
GATCCCGAGC TTGCCGGTAT CGCTGTGGAG AACTGGCACA GTTCGGGGGT GTGGGACGGC
TTGGCGCTGG TCGCCTTCGT CGGCGACGGG GAATCCGGGC GTCCCGCGCT GGCGCCGTTT
GACCGCGTGT CCGCAACACA CTCGGTGCGC CGGATCCCAG CCGCGTGGAT CGCGCAGACA
AGGCCGGGCG GGCTGGTGTG TGCGCCACTG AAGATCGGCC AGCCGGACCT GGACCTGTAT
GTGCAGCTGC GGGTCGGCGA GGACGGCACA GCCGAGGGCA GGGTGCGGTT CCCGGTGGAT
TTTATGGCCT CGCGCACCAG CCGGCCGCCC GCGCCGGCGA AGCAAGCCGA GGATGAGAAG
CGCTGCTCAG TAACGGATTG GAACCTACCG GCGGTCGTAG CCGCGAAGGA GGCATGGCCT
TCGCGGATCG CAGTTCCCGG CCTGAATGTC ACGGGGCCGC TTGTGGAGGA CGGCGACGAC
TGCATGTGGC TGTCGCTACC CGACGGGAGT TGGGCGGTTG CCTACGTCCC GCAAGGAGCG
CCGTGGAAGG ACGCCACGGT CGAGCAGCAC GGGCCGCAGG ATGTGTGGAG CCTCGCCGAG
GACGCGTGGG CGCGGTGGGA AGCCGCGGAC CGGCCGGGGA TCAACGAGTA TGGGCTGTCG
GTCGGTCGCG ACGAGACGCA CACGTTGTGG TGCCGGACGC CGGACAACGT CGTCGCGGTC
CTCAATTGA
 
Protein sequence
MPETHTDFAG RIAAEAYWED DTLADPAWRK VFDAVPRSAF APDDWFEWNG YGWDARHRAD 
NEQDWDEAVH AVTQPFITQV GDDNMPTCSL SAPMLVAAML GTLDLDDGMR VFESGTGTGW
TAALMAARVG PAGLVVTVEY DPELAGIAVE NWHSSGVWDG LALVAFVGDG ESGRPALAPF
DRVSATHSVR RIPAAWIAQT RPGGLVCAPL KIGQPDLDLY VQLRVGEDGT AEGRVRFPVD
FMASRTSRPP APAKQAEDEK RCSVTDWNLP AVVAAKEAWP SRIAVPGLNV TGPLVEDGDD
CMWLSLPDGS WAVAYVPQGA PWKDATVEQH GPQDVWSLAE DAWARWEAAD RPGINEYGLS
VGRDETHTLW CRTPDNVVAV LN