Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_2931 |
Symbol | |
ID | 8334281 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 3301916 |
End bp | 3302314 |
Gene Length | 399 bp |
Protein Length | 132 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 644956076 |
Product | hypothetical protein |
Protein accession | YP_003113681 |
Protein GI | 256392117 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.00240286 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.0090493 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACCAGCG AGCCCCGCAC CTTCCCGATC GCCGACGTCC TGAGCGTCAC CACAGGCGTG CTGCTGTCGC ACGACCACAT TGAGGGCGTG TACCGGATCC TGAATTTCCT TACTGGCGAC AGCCTGCTAA CGCACCAGCT ACCTGGCGCC GCGGAGGCGT GCAGGCCGCA GGTCATTGCG CAGCACCCGT GGCTTGCGGA CATCCAGCCA CCTGCCGGGC TTAATATGGC CGATCTGTTT TCGTGGCTGA CAGCAGTCGA GTCCGAGCAT CCGGAAGTTG CGCTCGTTCC GGTTGCCACC TGGGAGCGCC GCGATCCGAT CAAAGAGGCC TGTGACCTCG TCGGCGCGAA CAAGGTGATC GTATTGCCGG TCCTGCTGTC GGAGGGGCGG GAAGCGTGA
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Protein sequence | MTSEPRTFPI ADVLSVTTGV LLSHDHIEGV YRILNFLTGD SLLTHQLPGA AEACRPQVIA QHPWLADIQP PAGLNMADLF SWLTAVESEH PEVALVPVAT WERRDPIKEA CDLVGANKVI VLPVLLSEGR EA
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