Gene Caci_2924 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_2924 
Symbol 
ID8334274 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp3298020 
End bp3298778 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content66% 
IMG OID644956069 
Producthypothetical protein 
Protein accessionYP_003113674 
Protein GI256392110 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.018663 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0109649 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACCA CCCCCGACCC GAAGACCGTG CGCGAGATCG CACGCAAGCA CATCCAGTCT 
GGCCGCGCCG AGATCGACGC CACCATCGTT CAGCACTTCG GCCCCGGCCT GCTTGGCGCC
GATGAGTACT GGGCATGGGA GCGTGCCGTC GAGGACGAGC GGCGGAAGGC GGTCGTCACC
GTCGCCGTGT CGTGGCCGGA CGAGGAACCG CAGGAGTTCG AGTGCGAGGT CTGCACGAAG
CCGATCACGG GCTACCCGTG CATCCTGTGC GAGCACGAGC CCGACCCGTG GGCAGCGCAC
CGTTGCGACA ACTGCGAGGG TGTCGACCCG GGGTCGTGCG TGGCGAACGT AGGTGCCGTA
GTTGCCGTCG CCGAGAAGCC GCAGGACGAG CGTGACCTGT TCGCCGACAT TGCAGACATC
ACTGCCTGGC TGGACTCCTC GAACCCGTCA AGCAAGCACG AGGATGCGAT GCGCGTCATG
AAGCTCGGCG AGGAGGTGGG AGAAGCCATC GCCGCATACA TCGGGCTGAC GGGTCAAAAT
CCGCGCAAGG GTGTCACCCA CACCATGGAC GACCTGCTGA AGGAACTGGC GGACGTGGCA
ATCACCGCAC TTGCCGCGAT GCAGCACTTC ACGCAGGACG AGGCCGAGAC GCGGGCGCAT
ATGGCTGCGA AGGTTCGGCA GATCATCAGC CGGTCGGCCA TTCGCACGCG GGCCGGCGCC
GAGGCGCAAC TGGCTAATCT GGAAGGCGGC GAGCGCTGA
 
Protein sequence
MTTTPDPKTV REIARKHIQS GRAEIDATIV QHFGPGLLGA DEYWAWERAV EDERRKAVVT 
VAVSWPDEEP QEFECEVCTK PITGYPCILC EHEPDPWAAH RCDNCEGVDP GSCVANVGAV
VAVAEKPQDE RDLFADIADI TAWLDSSNPS SKHEDAMRVM KLGEEVGEAI AAYIGLTGQN
PRKGVTHTMD DLLKELADVA ITALAAMQHF TQDEAETRAH MAAKVRQIIS RSAIRTRAGA
EAQLANLEGG ER