Gene Caci_2909 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_2909 
Symbol 
ID8334259 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp3292030 
End bp3292245 
Gene Length216 bp 
Protein Length71 aa 
Translation table11 
GC content67% 
IMG OID644956054 
Producthypothetical protein 
Protein accessionYP_003113659 
Protein GI256392095 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000123649 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.0300749 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACATTCA TGGGCGACCT GCCGAAGCCC GGCAACGCCG GATACGAGGA ACACGCCTCG 
CCGCACGCGA TCCGTGCGCA CCTGCTGGAC GCACGGACCA AGCGGCGGCG TGTCCTCGCC
GAGTACGACA GGACAATTAA CTGGCTGGAG GAGCTGTTGC TCGACCGGAC GCAGCAGGTT
GCCGACGGGC AGTGGCCGAG GAGGGATGAG CGGTGA
 
Protein sequence
MTFMGDLPKP GNAGYEEHAS PHAIRAHLLD ARTKRRRVLA EYDRTINWLE ELLLDRTQQV 
ADGQWPRRDE R