| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_2836 |
|---|
| Symbol | |
|---|
| ID | 8334185 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | - |
|---|
| Start bp | 3241654 |
|---|
| End bp | 3242316 |
|---|
| Gene Length | 663 bp |
|---|
| Protein Length | 220 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 644955980 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003113586 |
|---|
| Protein GI | 256392022 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.0000263476 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.0000925306 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCCCATTC GAATCGGCGA TAAGTACGAA CGCTGGACCG TTGTTGAGGT TATCTCTAAG
CGCGAGGTGG CGTGCCGGTG CGATTGCGGC ACCGAAAGGT CTGTGCAGAT CGGAAACCTG
CGCCAAGGTA AGTCGCGGTC CTGCGGATGC CTGCAGCACA CCGTGGCCAT CGCGCCGGGC
GACCGCTTTG GCCGCCTGAC CATCCTCGCC GCCCCCACCA GGCTGGCAAT CAGGTGCCGG
TGCGATTGCG GCACCGAGAT GACCACCAAG GCAATCCACC TGGTTGCGAA GGCCGTACTC
TCCTGCGGAT GCCTCCGACG TGAAGTTACC CGCACCAGGG GGAGAAAGAA CCGCACTCAC
GGGCTCTCAA GTCACGAGCT GTACGGCACC TGGACGCGCA TGGTTGCCCG TTGCACCAAT
CCAAAGAGCG GGGACTATTC CTACTACGGC GGTCGCGGAA TACGGGTACA CGAGCCATGG
CTCCGCGTCG CAGTGTTCAT TCCCGAGATC GTTTCGCTGA TCGGGGAACG TCCCAAGGGC
CTGACGCTCG ACCGCATCGA CGTCAACGGC AACTACGAGC CGGGAAACGT GCGGTGGGCT
ACACGGCTCG AGCAGAGTCG GAACCAGCGC CCACGGCGTC AAAATCAGCA GCGCCCCCGG
TAG
|
|---|
| Protein sequence | MPIRIGDKYE RWTVVEVISK REVACRCDCG TERSVQIGNL RQGKSRSCGC LQHTVAIAPG
DRFGRLTILA APTRLAIRCR CDCGTEMTTK AIHLVAKAVL SCGCLRREVT RTRGRKNRTH
GLSSHELYGT WTRMVARCTN PKSGDYSYYG GRGIRVHEPW LRVAVFIPEI VSLIGERPKG
LTLDRIDVNG NYEPGNVRWA TRLEQSRNQR PRRQNQQRPR
|
|---|
| |