| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_2821 |
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| Symbol | |
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| ID | 8334170 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 3230131 |
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| End bp | 3231003 |
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| Gene Length | 873 bp |
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| Protein Length | 290 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644955965 |
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| Product | helix-turn-helix domain protein |
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| Protein accession | YP_003113571 |
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| Protein GI | 256392007 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.803112 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.00185272 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTATGTTC CGGGTGTGAC CTCACCGCCG GGCCCCGTCC ACTTACCTGC GACCGCATGG
CGCCGTCCGG ACGTGCGCCA AGCGCTTGGA GACAGGAACG TCAGCGCCCT GCTGCGGTTC
GCACAGCAGC ACACCGGCGC GTCCCAATCG CGGCTTGCCG AGGCCATCGG TATCGGGCAG
GGGCGCCTCA ACGAGTTGGT GAACCGGCGG CGTGAAGTCA CTTCGCTGGA GATGTTCGAA
CGCATTGCCG ACGGACTGAA CATGCCCGAC AGCGCCCGGA TGCTGTTGGG TCTGGCGCCC
TCCGGTATCC GCGCGGCCGG CGCCGCCGAC GACCTTGTAG CTGCGGCCGG GATCGTCGGT
CGCTACTACT CGGTACAGGC TGACGCTGCC CGCGACATAC GCCAGTTGGT GGCCGGCGCA
AGCGCCCTGG ACATCCTCGC GGTGCGTGGG CTCGGGCTGT GGGGCCTGAA CGACAGCCTG
CTGCGTGCGG CCATGACAAC GCCAACCAGG CCCGGCGCGC TGCTGGTCAG GGTGCTGATC
CTGGATGCCG ATAGCGATGC GGCAGCCCGA CGCGCGGTCG AGATCGGCGA GTCCCCTGAC
GGGTTCGCGG CCGGGATCCG CCTGGCGGAG CACAAGCTGG CGGAGCTCAC GCTTCACCCC
GCCATCAGCC TGGAGGCCTA CCGGTACACC GCGCTGCCGG TATGGCGGGT CATCTCCACG
GATGAGATCA GCTTCGTCTC GACGTTCGAC GAAGGTTGGG AGGGGCACGA GTCCCCCGTG
TGCCGTGTCG ACGTGCTGTC CGGGGCATCG CTGCACCGCG GCTTCCGGCG TGCGATCGAT
GAGCTTGTCG CAACCTCCGA ACGCTTCATC TGA
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| Protein sequence | MYVPGVTSPP GPVHLPATAW RRPDVRQALG DRNVSALLRF AQQHTGASQS RLAEAIGIGQ
GRLNELVNRR REVTSLEMFE RIADGLNMPD SARMLLGLAP SGIRAAGAAD DLVAAAGIVG
RYYSVQADAA RDIRQLVAGA SALDILAVRG LGLWGLNDSL LRAAMTTPTR PGALLVRVLI
LDADSDAAAR RAVEIGESPD GFAAGIRLAE HKLAELTLHP AISLEAYRYT ALPVWRVIST
DEISFVSTFD EGWEGHESPV CRVDVLSGAS LHRGFRRAID ELVATSERFI
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