Gene Caci_2814 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_2814 
Symbol 
ID8334163 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp3225438 
End bp3226403 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content67% 
IMG OID644955959 
Producthypothetical protein 
Protein accessionYP_003113565 
Protein GI256392001 
COG category 
COG ID 
TIGRFAM ID[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.376076 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.0639753 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACAGAA GAACCCTGTT GAAGTCCGCG GTCGCGGTGG GCGCCGCGGT GCCCGCAGCC 
TCGCTGCTCG GGGCGGGTCC GGCACAGGCC GCGATCTCGT ACGACGTGGC GGTGTGCGAG
CAGTATCGCA ACCAGGTCCA GATTTATACC AACACCTCCA CCTGGACCAC CCCCAAGTGG
ATCTTCTCGC CCGGCGGCGG GGGCTGGTCG AACCTGTCCG ACGTCAAGTT CCGGAGCACC
GCCGCGTTCG GCGAGATCGC GCTGTTCACG GCGTCCGGCG GCAACGTCGG CCTCCTGAAG
AAGAGCGCGT CCGGCACCCA GGGCACCGGC AGCCTGCTGT GGTCGGCCAG CCCTGGCGAC
AATCCGCACG CGATCGAGCG GATCCCGAAC GTCGGGGCGA TCGTCACCGC CTCCACCACC
CCGGGAAAAC TGAGCGTCTA CGCCCCGACC GCGGTCAGCG ACCCGAGCAC CCTCGCGCTG
GTGCAGACGA TCTCGTTCCC CGGCGCCCAC GGCCTGTGGT TCGACGACGT GGCAAACCGC
CTGTGGGCGA TCGGCCAGGA CAAGGCCACG TCGTACCCGA TCTCCGGAAC CTACCGCTCC
TTCCGGCTCG GCGCCGGAAC CAATGTCAGT ATCGGCTCGA GCCTGGGCCA CAGCCTCGAC
GCGGCCTACA ACGACTCCGG CCTCCTGCTG GCCTCCCGCA GCGGCTCGGT GATCTCCATC
CAGAAGACCA CGCACGTCGT CACCGTGATC CACGAGAACT CAAGCGTGAA GTCGTTCTCC
ATGTACCAGT CCGGCGAGGC ATTCTGGGTC CAGGCGACCG GCAAGGACTA CCACGGAGAC
ACCCGCAACT GGGTCAACCC GAACGTCCAG TTCTTCGACC CGGTGGGCGA CCCCTCCTTC
ACCCGCGGCC TGTCCTACGG CGCGGAGTTC TACAAGGCCC GCCTGCACAA CGTGAACTAC
CACTGA
 
Protein sequence
MDRRTLLKSA VAVGAAVPAA SLLGAGPAQA AISYDVAVCE QYRNQVQIYT NTSTWTTPKW 
IFSPGGGGWS NLSDVKFRST AAFGEIALFT ASGGNVGLLK KSASGTQGTG SLLWSASPGD
NPHAIERIPN VGAIVTASTT PGKLSVYAPT AVSDPSTLAL VQTISFPGAH GLWFDDVANR
LWAIGQDKAT SYPISGTYRS FRLGAGTNVS IGSSLGHSLD AAYNDSGLLL ASRSGSVISI
QKTTHVVTVI HENSSVKSFS MYQSGEAFWV QATGKDYHGD TRNWVNPNVQ FFDPVGDPSF
TRGLSYGAEF YKARLHNVNY H